RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 FAM124AQ86V42 546 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MFSD2AQ8NA29 543 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 VPS37AQ8NEZ2 397 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 WDR48Q8TAF3 677 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SMPDL3AQ92484 453 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SNX19Q92543 992 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SIPA1Q96FS4 1042 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RMI1Q9H9A7 625 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PREBQ9HCU5 417 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SH3BP4Q9P0V3 963 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TSC22D4Q9Y3Q8 395 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PLEKHM1Q9Y4G2 1056 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 EI24O14681 340 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PRKD3O94806 890 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FAM58BPP0C7Q3 252 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MYBPC1Q00872 1141 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NTN4Q9HB63 628 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 IMP3Q9NV31 184 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CUEDC1Q9NWM3 386 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SPATA7Q9P0W8 599 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 BTNL2Q9UIR0 455 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SCML1Q9UN30 329 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 A0A1W2PPV9 198 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DEAF1O75398 565 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SERPINA1P01009 418 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 KLK1P06870 262 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF23P17027 643 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 GPX2P18283 190 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PTX3P26022 381 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ANXA8L1Q5VT79 327 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CARM1Q86X55 608 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TFAP2CQ92754 450 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CXorf40BQ96DE9 158 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PCBD2Q9H0N5 130 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 REEP4Q9H6H4 257 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C8orf4Q9NR00 106 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 AASDHPPTQ9NRN7 309 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF639Q9UID6 485 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FZD4Q9ULV1 537 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 GPSM3Q9Y4H4 160 aa13.55□□□□□ -0.24
CDK5RAP1-202ENST00000346416 H7BY64 318 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 UPK1AO00322 258 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 KLHL18O94889 574 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TNFAIP8O95379 198 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DRD1P21728 446 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MC1RQ01726 317 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CLCA4Q14CN2 919 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZCCHC8Q6NZY4 707 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 IYDQ6PHW0 289 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PNPT1Q8TCS8 783 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C16orf78Q8WTQ4 265 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MRGPRX1Q96LB2 322 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PRAP1Q96NZ9 151 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 AIF1LQ9BQI0 150 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PELI2Q9HAT8 420 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TPT1P8Q9HAU6 139 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 WASH6PQ9NQA3 447 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ATP6V1HQ9UI12 483 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 UTS2RQ9UKP6 389 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PCDHB11Q9Y5F2 797 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 HEATR5BQ9P2D3 2071 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 POM121BA6NF01 834 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ANKDD1BA6NHY2 528 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 OR52A4PA6NMU1 304 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SCAMP1O15126 338 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PRSS23O95084 383 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 KCNK5O95279 499 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CXCR2P25025 360 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CCR8P51685 355 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TAS2R50P59544 299 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 GPR155Q7Z3F1 870 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ANKRD53Q8N9V6 530 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CAMK1GQ96NX5 476 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FAM192AQ9GZU8 254 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RHBGQ9H310 441 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FGF22Q9HCT0 170 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NCKAP1Q9Y2A7 1128 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms