RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FGBP02675 491 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CISD3P0C7P0 127 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 JUNBP17275 347 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 TNFRSF1BP20333 461 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 IDSP22304 550 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 TIA1P31483 386 aaKnown RBP eCLIP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 BMPR1AP36894 532 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CAPN13Q6MZZ7 669 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 ERICH5Q6P6B1 374 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 KLHL35Q6PF15 583 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CACUL1Q86Y37 369 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 NAGSQ8N159 534 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 VPS37AQ8NEZ2 397 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 SPPL3Q8TCT6 385 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CHTF18Q8WVB6 975 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 ABTB1Q969K4 478 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CIDECQ96AQ7 238 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 IL17FQ96PD4 163 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 CSF3RQ99062 836 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 RHNO1Q9BSD3 238 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 TMEM121BQ9BXQ6 578 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 SPNS1Q9H2V7 528 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
VIPAS39-202ENST00000343765 SPEGQ15772 3267 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 DNAJA1P31689 397 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 ASMTP46597 345 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 CLK3P49761 638 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 NFE2L1Q14494 772 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 RFX4Q33E94 735 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 SPIN4Q56A73 249 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 COX20Q5RI15 118 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 FAM180BQ6P0A1 224 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 CBLL1Q75N03 491 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 EIF3MQ7L2H7 374 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 COMMD6Q7Z4G1 85 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 C12orf76Q8N812 135 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF740Q8NDX6 193 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 TBC1D15Q8TC07 691 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 NUS1Q96E22 293 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 NRTNQ99748 197 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 ACAT2Q9BWD1 397 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 DYRK1BQ9Y463 629 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 GMPPBQ9Y5P6 360 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 DGKBQ9Y6T7 804 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 SLC16A6O15403 523 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 C6P13671 934 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 HSD3B1P14060 373 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 NPPBP16860 134 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 HSD3B2P26439 372 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 CRYBA2P53672 197 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 RGNQ15493 299 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 SMN1Q16637 294 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 GTF2IRD2BQ6EKJ0 949 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 GPR155Q7Z3F1 870 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 GTF2IRD2Q86UP8 949 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 OR5AK3PQ8NH89 298 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 WDR48Q8TAF3 677 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 TANKQ92844 425 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 COQ10AQ96MF6 247 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 RUBCNLQ9H714 662 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 REEP1Q9H902 201 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 RASSF1Q9NS23 344 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 THUMPD1Q9NXG2 353 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 GALNT8Q9NY28 637 aa14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 EXO1Q9UQ84 846 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-202ENST00000343765 C1orf226A1L170 272 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 SLC9A3R1O14745 358 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 AXIN1O15169 862 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 C6orf47O95873 294 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 TFPTP0C1Z6 253 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ETFAP13804 333 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 FPR1P21462 350 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 MAP2K4P45985 399 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 TMBIM6P55061 237 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF33BQ06732 778 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 GRSF1Q12849 480 aaKnown RBP eCLIP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 CYP27C1Q4G0S4 372 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 LAIR1Q6GTX8 287 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 CCDC81Q6ZN84 652 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ARMCX6Q7L4S7 300 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 B3GNT8Q7Z7M8 397 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 TTC29Q8NA56 475 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 UBE2FQ969M7 185 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 OTUB2Q96DC9 234 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 LRIG1Q96JA1 1093 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 FAM83CQ9BQN1 747 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 FUNDC2Q9BWH2 189 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 PLGRKTQ9HBL7 147 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 KRT84Q9NSB2 600 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 SIRT5Q9NXA8 310 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 TMEM9Q9P0T7 183 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ERVK-18Q9QC07 812 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 TMEM98Q9Y2Y6 226 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 PIPSLA2A3N6 862 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ANKRD33BA6NCL7 494 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms