RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 ACAT2Q9BWD1 397 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 MBNL1Q9NR56 388 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 SERGEFQ9UGK8 458 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 SAMD4AQ9UPU9 718 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 LINC01565O15544 149 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 NUDT7P0C024 238 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 SHMT2P34897 504 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 MAGEA2P43356 314 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 YAP1P46937 504 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 MC1RQ01726 317 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 ANXA8L1Q5VT79 327 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 CWF19L1Q69YN2 538 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 B3GNT6Q6ZMB0 384 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 ZDHHC21Q8IVQ6 265 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 PGBD3Q8N328 593 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 OR4K1Q8NGD4 311 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 POP5Q969H6 163 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 MBOAT4Q96T53 435 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 AMBRA1Q9C0C7 1298 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 FAM118AQ9NWS6 357 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 FZD4Q9ULV1 537 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 C2orf16Q68DN1 1984 aa15.29■□□□□ 0.04
CCDC144A-202ENST00000340621 RFXAPO00287 272 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 E2F6O75461 281 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 NTRK1P04629 796 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 KELP23276 732 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ZNF763Q0D2J5 394 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RPA4Q13156 261 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 GAB1Q13480 694 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 CST6Q15828 149 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 PRAMEF14Q5SWL7 426 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 CCNYL2Q5T2Q4 361 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 C10orf62Q5T681 223 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 PRAMEF13Q5VWM6 474 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 METRNLQ641Q3 311 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 SYCE2Q6PIF2 218 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 OR5K1Q8NHB7 308 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ADAMTS16Q8TE57 1224 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 MYADMQ96S97 322 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RBM4BQ9BQ04 359 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RPP25Q9BUL9 199 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RBM4Q9BWF3 364 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 REEP4Q9H6H4 257 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 IL1RAPQ9NPH3 570 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 DZANK1Q9NVP4 752 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 SIRT5Q9NXA8 310 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 VNN3Q9NY84 501 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 USE1Q9NZ43 259 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ATP6V1HQ9UI12 483 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ABCG2Q9UNQ0 655 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 MAPRE3Q9UPY8 281 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 OR1A2Q9Y585 309 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 KLK1P06870 262 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ABCB1P08183 1280 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ELK4P28324 431 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 C2orf27AQ580R0 203 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ERICH5Q6P6B1 374 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 TMIGD1Q6UXZ0 262 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 CHST15Q7LFX5 561 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 VN1R5Q7Z5H4 357 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 VTCN1Q7Z7D3 282 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 PJA1Q8NG27 643 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 OR4A15Q8NGL6 344 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 ZFP90Q8TF47 636 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 MPP4Q96JB8 637 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 CHST8Q9H2A9 424 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 PTTG2Q9NZH5 202 aa15.28■□□□□ 0.04
CCDC144A-202ENST00000340621 RNASET2O00584 256 aaKnown RBP15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 B4GAT1O43505 415 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 PAK4O96013 591 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 HOXB6P17509 224 aaKnown RBP15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 GDI1P31150 447 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 SLC5A2P31639 672 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 PIGAP37287 484 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 PIK3CBP42338 1070 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 SOX9P48436 509 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 CAMK2GQ13555 558 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 RGNQ15493 299 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 PARM1Q6UWI2 310 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 FAM129CQ86XR2 697 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 DCUN1D3Q8IWE4 304 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 NAGSQ8N159 534 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 METTL4Q8N3J2 472 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 HDDC3Q8N4P3 179 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 C16orf78Q8WTQ4 265 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 FGF14Q92915 247 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 MAL2Q969L2 176 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 RDH12Q96NR8 316 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 VCX3AQ9NNX9 186 aa15.27■□□□□ 0.04
CCDC144A-202ENST00000340621 A0A1W2PP55 124 aa15.27■□□□□ 0.03
CCDC144A-202ENST00000340621 HS6ST1O60243 411 aa15.27■□□□□ 0.03
CCDC144A-202ENST00000340621 PCSK6P29122 969 aa15.27■□□□□ 0.03
CCDC144A-202ENST00000340621 CASP9P55211 416 aa15.27■□□□□ 0.03
CCDC144A-202ENST00000340621 TAS2R50P59544 299 aa15.27■□□□□ 0.03
CCDC144A-202ENST00000340621 HBA1P69905 142 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms