RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 COL26A1Q96A83 441 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 MRPL38Q96DV4 380 aaKnown RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 SLC17A9Q9BYT1 436 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TRIT1Q9H3H1 467 aaKnown RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 CTPS2Q9NRF8 586 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 DZANK1Q9NVP4 752 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TRPC4Q9UBN4 977 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 FBXW2Q9UKT8 454 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 SH3GLB1Q9Y371 365 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 CKAP5Q14008 2032 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 GSAPA4D1B5 854 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 CACNB4O00305 520 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TNFAIP8O95379 198 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 GPIP06744 558 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 PRPS1L1P21108 318 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 PTNP21246 168 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 NR4A1P22736 598 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 SSR2P43308 183 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 C1orf61Q13536 156 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 FOXB2Q5VYV0 432 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 LIPJQ5W064 366 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 ARMCX6Q7L4S7 300 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 NRSN1Q8IZ57 195 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 RAB8BQ92930 207 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 SH3GL1Q99961 368 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TPSD1Q9BZJ3 242 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TRIM4Q9C037 500 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 EQTNQ9NQ60 294 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 AASDHPPTQ9NRN7 309 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 POU2F1P14859 743 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 IL7RP16871 459 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 MAPK12P53778 367 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 FOXM1Q08050 763 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 OR52E8Q6IFG1 317 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 GRHL2Q6ISB3 625 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 UGT2A3Q6UWM9 527 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 KIAA0907Q7Z7F0 614 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TBC1D21Q8IYX1 336 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 L3MBTL4Q8NA19 623 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 TSPAN14Q8NG11 270 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 BTBD9Q96Q07 612 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 VPS35Q96QK1 796 aa9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 INSM2Q96T92 566 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 ZFR2Q9UPR6 939 aaKnown RBP9.78□□□□□ -0.84
RBFOX1-202ENST00000340209 KCNE1BA0A087WTH5 132 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 TCRBV21S2A2A0A5A6 115 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 MITFO75030 526 aaPredicted RBP9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 C9P02748 559 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 TCF3P15923 654 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 GGT1P19440 569 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 NTSR1P30989 418 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 RFX3P48380 749 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 ZNF385BQ569K4 471 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 ZNF551Q7Z340 670 aaPredicted RBP9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 PROSER1Q86XN7 944 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 DCUN1D3Q8IWE4 304 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 TRIM48Q8IWZ4 208 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 ATG16L2Q8NAA4 619 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 OR2L2Q8NH16 312 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 PATE1Q8WXA2 126 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 TMIGD2Q96BF3 282 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 DCUN1D5Q9BTE7 237 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 UGT2B28Q9BY64 529 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 PAIP1Q9H074 479 aaKnown RBP9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 RAB23Q9ULC3 237 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 TESMINQ9Y4I5 508 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 URB1O60287 2271 aaKnown RBP9.77□□□□□ -0.84
RBFOX1-202ENST00000340209 G3V2T6 193 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 SLC16A5O15375 505 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZBTB11O95625 1053 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 FUCA1P04066 466 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 KELP23276 732 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ELK4P28324 431 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 TIA1P31483 386 aaKnown RBP eCLIP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 GAB1Q13480 694 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 MAP7Q14244 749 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 DUOXA1Q1HG43 343 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 NADK2Q4G0N4 442 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 LIN52Q52LA3 116 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 NXPE4Q6UWF7 544 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZDHHC21Q8IVQ6 265 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 SFTPA2Q8IWL1 248 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZNF548Q8NEK5 533 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RIPOR3Q96MK2 946 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 OSBPL11Q9BXB4 747 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ASPSCR1Q9BZE9 553 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 FGF22Q9HCT0 170 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 AGPAT4Q9NRZ5 378 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RAB26Q9ULW5 256 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 PCM1Q15154 2024 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZNF860A6NHJ4 632 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 PI15O43692 258 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 HTR1EP28566 365 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 MERTKQ12866 999 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RAB30Q15771 203 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms