RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 FRMPD2BQ6IN97 320 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 ASPGQ86U10 573 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 LRRC34Q8IZ02 419 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 CREB3L4Q8TEY5 395 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 RERGQ96A58 199 aaPredicted RBP17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 LIN37Q96GY3 246 aaPredicted RBP17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 CCT7Q99832 543 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 BRF2Q9HAW0 419 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 DMRT3Q9NQL9 472 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
SDCBP2-201ENST00000339987 MDC1Q14676 2089 aaKnown RBP17.08■□□□□ 0.33
SDCBP2-201ENST00000339987 LOC105369274A0A096LPK9 316 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 LOC102723532A0A0G2JNH3 316 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 HDAC3O15379 428 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 HCRTR1O43613 425 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 TGDSO95455 350 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 PDYNP01213 254 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 FOLR1P15328 257 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 NEK2P51955 445 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 CBX1P83916 185 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 CSTF3Q12996 717 aaKnown RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 KCNAB1Q14722 419 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 ABRAXAS2Q15018 415 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 DEFB110Q30KQ9 67 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 SGO1Q5FBB7 561 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 ADNP2Q6IQ32 1131 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 TRIM46Q7Z4K8 759 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 WDR75Q8IWA0 830 aaKnown RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 OR4N4Q8N0Y3 316 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 NT5CQ8TCD5 201 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 MTERF1Q99551 399 aaKnown RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 TUBB1Q9H4B7 451 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 FARSBQ9NSD9 589 aaKnown RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 FGFR1OP2Q9NVK5 253 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 AKAP7Q9P0M2 348 aaPredicted RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 MARCOQ9UEW3 520 aaPredicted RBP17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 CLCA2Q9UQC9 943 aa17.08■□□□□ 0.32
SDCBP2-201ENST00000339987 SRRM3A6NNA2 597 aaPredicted RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 TXNDC9O14530 226 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 SHOX2O60902 331 aaPredicted RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 SERPINA6P08185 405 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 VSX2P58304 361 aaPredicted RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 CYP4F2P78329 520 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 DDX39BQ13838 428 aaKnown RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 GPR19Q15760 415 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 TCTE1Q5JU00 501 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 MANEAQ5SRI9 462 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 ZNF655Q8N720 491 aaPredicted RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC13A3Q8WWT9 602 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 ADAMTS14Q8WXS8 1223 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 ZNF501Q96CX3 271 aaPredicted RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 MTFMTQ96DP5 389 aaKnown RBP17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 CMTM7Q96FZ5 175 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 MS4A8Q9BY19 250 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 FANCEQ9HB96 536 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 FGF21Q9NSA1 209 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 DLL3Q9NYJ7 618 aa17.07■□□□□ 0.32
SDCBP2-201ENST00000339987 GMNCA6NCL1 334 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 MAGEB17A8MXT2 336 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC28A1O00337 649 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 PIP5K1BO14986 540 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 NDUFS4O43181 175 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 SKAP2O75563 359 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 TBX6O95947 436 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 SLC35G6P0C7Q6 338 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 KITP10721 976 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 ALOX15P16050 662 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 CLDN6P56747 220 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 RPS13P62277 151 aaKnown RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 BTKQ06187 659 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 RGS1Q08116 209 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 TUBB3Q13509 450 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 XKR7Q5GH72 579 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 BPHLQ86WA6 291 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 TMPRSS12Q86WS5 348 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 CSNK1A1LQ8N752 337 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 BMPERQ8N8U9 685 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 CCT6BQ92526 530 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 N4BP2L2Q92802 583 aaPredicted RBP17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 SERPINI1Q99574 410 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 CMKLR1Q99788 373 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 NLNQ9BYT8 704 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 ACPTQ9BZG2 426 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
SDCBP2-201ENST00000339987 CCDC187A0A096LP49 1063 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 TRPC5OSA6NMA1 111 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 EFCAB7A8K855 629 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 B4E171 279 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 TMEM150CB9EJG8 249 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 NPIPB8E9PQR5 432 aa17.05■□□□□ 0.32
SDCBP2-201ENST00000339987 H3BMH7 237 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms