RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF234Q14588 700 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CTSL3PQ5NE16 218 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 METTL2BQ6P1Q9 378 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PARS2Q7L3T8 475 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR5P2Q8WZ92 322 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MRPL48Q96GC5 212 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 WASH3PC4AMC7 463 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 AGRPO00253 132 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LARS2Q15031 903 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SNAPC1Q16533 368 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MFSD6LQ8IWD5 586 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LGI4Q8N135 537 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR2A12Q8NGT7 310 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SETD7Q8WTS6 366 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 HMGB4Q8WW32 186 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 APIPQ96GX9 242 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ACSL5Q9ULC5 683 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR10H1Q9Y4A9 318 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TRPM6Q9BX84 2022 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 E7EQ34 232 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR6B1O95007 311 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SBK3P0C264 359 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CENPAP49450 140 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CCR4P51679 360 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LAPTM4AQ15012 233 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CST6Q15828 149 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PHF21AQ96BD5 680 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 P2RY13Q9BPV8 354 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 YTHDF1Q9BYJ9 559 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 POLE3Q9NRF9 147 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CCNB2O95067 398 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARRB2P32121 409 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 RGS21Q2M5E4 152 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CMPK2Q5EBM0 449 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR4E2Q8NGC2 313 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SLC29A1Q99808 456 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 C17orf62Q9BQA9 187 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 H0YJX3 145 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PSMD11O00231 422 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MTHFD2P13995 350 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 JAK1P23458 1154 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SPANXN2Q5MJ10 180 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 Q6ZSR9 355 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SPNS2Q8IVW8 549 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CCDC103Q8IW40 242 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LKAAEAR1Q8TD35 194 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 GATA6Q92908 595 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PKP4Q99569 1192 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 THUMPD1Q9NXG2 353 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 STOX2Q9P2F5 926 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CLEC4EQ9ULY5 219 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SNAP29O95721 258 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 HSD3B1P14060 373 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 HSD3B2P26439 372 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CRISP3P54108 245 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 STX4Q12846 297 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SUZ12Q15022 739 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MAPK11Q15759 364 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 KCTD21Q4G0X4 260 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TEX47Q8TBZ9 253 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PHOSPHO2Q8TCD6 241 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 RAB8BQ92930 207 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF689Q96CS4 500 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LRRC46Q96FV0 321 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARMC1Q9NVT9 282 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 NCOR1O75376 2440 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 NUDT14O95848 222 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PEX11BO96011 259 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ADH1BP00325 375 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TIMP2P16035 220 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CLCN7P51798 805 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TBPL1P62380 186 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 BTN3A2P78410 334 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 RCAN2Q14206 197 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PON2Q15165 354 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 NPTX1Q15818 432 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ATP6AP1Q15904 470 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM207Q6UWW9 146 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OR52L1Q8NGH7 329 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 HUS1BQ8NHY5 278 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 KXD1Q9BQD3 176 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 RTCAO00442 366 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 IMPDH2P12268 514 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 BMP2P12643 396 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARSAP15289 507 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LRRC26Q2I0M4 334 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PERM1Q5SV97 790 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SBSNQ6UWP8 590 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 KBTBD8Q8NFY9 601 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 INTS6Q9UL03 887 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 IL7RP16871 459 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CEBPBP17676 345 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RFLNAQ6ZTI6 216 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 OXR1Q8N573 874 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NFKBIDQ8NI38 313 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SLC35A5Q9BS91 424 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 IL21Q9HBE4 155 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 PDFQ9HBH1 243 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms