RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 FLVCR1-AS1Q8TAF5 88 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 PATE1Q8WXA2 126 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 STARD8Q92502 1023 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 SLC22A18Q96BI1 424 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 OR52E6Q96RD3 313 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 DUSP15Q9H1R2 295 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-202ENST00000338045 MAPRE3Q9UPY8 281 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 MAN2B2Q9Y2E5 1009 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 EML5Q05BV3 1969 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 CCDC163A0A0D9SF12 145 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 FAM221BA6H8Z2 402 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 LCMT2O60294 686 aaKnown RBP14.82□□□□□ -0.04
LIMS1-202ENST00000338045 BCAS2O75934 225 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-202ENST00000338045 VIPP01282 170 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 HSD17B1P14061 328 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 GSTM2P28161 218 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 CMPK1P30085 196 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 S100A3P33764 101 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 SRSF11Q05519 484 aaKnown RBP14.82□□□□□ -0.04
LIMS1-202ENST00000338045 DMWDQ09019 674 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 KIR2DS3Q14952 304 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 UGT8Q16880 541 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 KHDRBS2Q5VWX1 349 aaKnown RBP14.82□□□□□ -0.04
LIMS1-202ENST00000338045 NANOGP8Q6NSW7 305 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 CAMKMTQ7Z624 323 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 SLC9B2Q86UD5 537 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 FAM156AQ8NDB6 213 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 DNAJB8Q8NHS0 232 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 SLC37A2Q8TED4 501 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 NANOGQ9H9S0 305 aa14.82□□□□□ -0.04
LIMS1-202ENST00000338045 GON4LQ3T8J9 2241 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 OR1F1O43749 312 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 FKBP6O75344 327 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 CLEC3AO75596 197 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 KLHL18O94889 574 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 LRATO95237 230 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 KCNH1O95259 989 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 MSX2P35548 267 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-202ENST00000338045 HNRNPFP52597 415 aaKnown RBP14.81□□□□□ -0.04
LIMS1-202ENST00000338045 ZNF763Q0D2J5 394 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 TRAP1Q12931 704 aaKnown RBP14.81□□□□□ -0.04
LIMS1-202ENST00000338045 C1orf61Q13536 156 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 FLOT2Q14254 428 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 RCN1Q15293 331 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 KIAA1614Q5VZ46 1190 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 FAM20CQ8IXL6 584 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 OR8J2Q8NGG1 315 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 DNAJB14Q8TBM8 379 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 CREB3L4Q8TEY5 395 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 CGREF1Q99674 301 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 DPH7Q9BTV6 452 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 ZNF717Q9BY31 904 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-202ENST00000338045 SERHLQ9NQF3 203 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 STX18Q9P2W9 335 aaKnown RBP14.81□□□□□ -0.04
LIMS1-202ENST00000338045 MCM8Q9UJA3 840 aa14.81□□□□□ -0.04
LIMS1-202ENST00000338045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ISM1B1AKI9 464 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 H0Y3Z8 333 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SAP18O00422 153 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SCAMP2O15127 329 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 TCN1P20061 433 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 GRK3P35626 688 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 KIR3DL1P43629 444 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 NXPH1P58417 271 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 PLCL1Q15111 1095 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 RABL3Q5HYI8 236 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 LRIF1Q5T3J3 769 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ADCK2Q7Z695 626 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 GPR180Q86V85 440 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SFTPA2Q8IWL1 248 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 TMEFF1Q8IYR6 380 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 WDR48Q8TAF3 677 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 GFM2Q969S9 779 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 MIR1-1HGQ9H1L0 117 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 KCNH6Q9H252 994 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 PRM3Q9NNZ6 103 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 AHSPQ9NZD4 102 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 BCAP29Q9UHQ4 241 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SNX7Q9UNH6 387 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ABCA7Q8IZY2 2146 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 TRBV5-3A0A0A0MS03 114 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 GNG14A0A1W2PPG7 69 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 PLPP1O14494 284 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 AKAP10O43572 662 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SCN2BO60939 215 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ERN1O75460 977 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 HOXB9P17482 250 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 AHRP35869 848 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 BCL6P41182 706 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 WNT3P56703 355 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 EEFSECP57772 596 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 CYP4F2P78329 520 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 SIGLEC14Q08ET2 396 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 ELOCQ15369 112 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 C6orf10Q5SRN2 563 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 PLD3Q8IV08 490 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 RBM12BQ8IXT5 1001 aaKnown RBP14.8□□□□□ -0.04
LIMS1-202ENST00000338045 FAM46DQ8NEK8 389 aa14.8□□□□□ -0.04
LIMS1-202ENST00000338045 OR7A2PQ8NGA2 310 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms