RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MS4A8Q9BY19 250 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 SLC52A3Q9NQ40 469 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 TMEM45AQ9NWC5 275 aa14.07□□□□□ -0.16
CBX3-201ENST00000337620 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.07□□□□□ -0.16
CBX3-201ENST00000337620 A0A1W2PP18 115 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 OR5K3A6NET4 321 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 BBIP1A8MTZ0 92 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 UBXN7O94888 489 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 TBX6O95947 436 aaPredicted RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 GBAP04062 536 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 SP9P0CG40 484 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 ACPPP15309 386 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 DGKQP52824 942 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 CLDN8P56748 225 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 CYP4F3Q08477 520 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 ANGPT1Q15389 498 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 C14orf28Q4W4Y0 310 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 DEPDC1Q5TB30 811 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 KHDRBS2Q5VWX1 349 aaKnown RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 RETREG3Q86VR2 466 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PAQR7Q86WK9 346 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 ARHGAP24Q8N264 748 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 WDR48Q8TAF3 677 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 TSPEARQ8WU66 669 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 C11orf24Q96F05 449 aaPredicted RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 CLPTM1LQ96KA5 538 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PPM1MQ96MI6 270 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 TWSG1Q9GZX9 223 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 IL1RL2Q9HB29 575 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PPT2Q9UMR5 302 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 TMEM131Q92545 1883 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 TNRC6BQ9UPQ9 1833 aaKnown RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 AKAP10O43572 662 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PCDH7O60245 1069 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 TIA1P31483 386 aaKnown RBP eCLIP14.06□□□□□ -0.169e-11■■■■□ 23.8
CBX3-201ENST00000337620 PI4KAP42356 2102 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 RXRGP48443 463 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 RAP1GDS1P52306 607 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PPP1CAP62136 330 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 SHBQ15464 509 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 LPAL2Q16609 132 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 BMP8AQ7Z5Y6 402 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 C17orf82Q86X59 251 aaPredicted RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 GLB1L3Q8NCI6 653 aaPredicted RBP14.06□□□□□ -0.16
CBX3-201ENST00000337620 MACROD1Q9BQ69 325 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 NDE1Q9NXR1 346 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 AHSPQ9NZD4 102 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 CSNK1G3Q9Y6M4 447 aa14.06□□□□□ -0.16
CBX3-201ENST00000337620 RHPN2P1A8MT19 583 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CLEC3AO75596 197 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 KLK1P06870 262 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 PVRP15151 417 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 SLC5A12Q1EHB4 618 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 ZNF528Q3MIS6 628 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 FAM174BQ3ZCQ3 159 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 C6orf132Q5T0Z8 1188 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 KLHL35Q6PF15 583 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 FIGLAQ6QHK4 219 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 EFCAB3Q8N7B9 438 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CREB3L4Q8TEY5 395 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 FCRL4Q96PJ5 515 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 SORBS1Q9BX66 1292 aaKnown RBP14.05□□□□□ -0.16
CBX3-201ENST00000337620 CLMPQ9H6B4 373 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 AP1M2Q9Y6Q5 423 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CACNA1EQ15878 2313 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 ASPDHA6ND91 283 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 RTCAO00442 366 aaKnown RBP14.05□□□□□ -0.16
CBX3-201ENST00000337620 NDUFS4O43181 175 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 TNFSF14O43557 240 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 AHRP35869 848 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 LSSP48449 732 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CLNS1AP54105 237 aaKnown RBP14.05□□□□□ -0.16
CBX3-201ENST00000337620 DUOXA1Q1HG43 343 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 HKDC1Q2TB90 917 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 HLA-BQ31612 363 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 PGS1Q32NB8 556 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 PAGE3Q5JUK9 113 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 SPANXN4Q5MJ08 99 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 FCRL6Q6DN72 434 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 GALNT18Q6P9A2 607 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 GATAD2AQ86YP4 633 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 SCUBE1Q8IWY4 988 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 PGAM4Q8N0Y7 254 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 MFSD9Q8NBP5 474 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 ZBTB44Q8NCP5 570 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 TRPV3Q8NET8 790 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 ZUFSPQ96AP4 578 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CDRT15Q96T59 188 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 CENPKQ9BS16 269 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 SARGQ9BW04 601 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 MMADHCQ9H3L0 296 aaPredicted RBP14.05□□□□□ -0.16
CBX3-201ENST00000337620 UCK1Q9HA47 277 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 EVA1BQ9NVM1 165 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 LRIT1Q9P2V4 623 aa14.05□□□□□ -0.16
CBX3-201ENST00000337620 LEF1Q9UJU2 399 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms