RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SPANXN3Q5MJ09 141 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 HIBCHQ6NVY1 386 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-202ENST00000337571 PAQR3Q6TCH7 311 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 GFRALQ6UXV0 394 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 KIAA0408Q6ZU52 694 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ASPGQ86U10 573 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 FJX1Q86VR8 437 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 C2CD4AQ8NCU7 369 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-202ENST00000337571 LINGO1Q96FE5 620 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 OSBPL9Q96SU4 736 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 MACROD1Q9BQ69 325 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SLX1AQ9BQ83 275 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 VN1R1Q9GZP7 353 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 RNF32Q9H0A6 362 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SYNPO2LQ9H987 977 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 KCNK13Q9HB14 408 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ARL15Q9NXU5 204 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 HCN3Q9P1Z3 774 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ABI3Q9P2A4 366 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 PDE10AQ9Y233 779 aa10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SPTAN1Q13813 2472 aaKnown RBP10.08□□□□□ -0.8
CAPN3-202ENST00000337571 SCN3AQ9NY46 2000 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 IGHV3-20A0A0C4DH32 117 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 FEZF1A0PJY2 475 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 ENO4A6NNW6 628 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 E2F3O00716 465 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 OR1F1O43749 312 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 AHSGP02765 367 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 SERPIND1P05546 499 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 CELA2AP08217 269 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 STSP08842 583 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NPPBP16860 134 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 IL1RNP18510 177 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 IL10P22301 178 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 CASP6P55212 293 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 RBPJQ06330 500 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 CSHL1Q14406 222 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NAA30Q147X3 362 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 HERC3Q15034 1050 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 ZRSR2Q15696 482 aaKnown RBP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NSDHLQ15738 373 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 EXT1Q16394 746 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 RNASEH2BQ5TBB1 312 aaKnown RBP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 C1QL3Q5VWW1 255 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NIPAL1Q6NVV3 410 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 LCTLQ6UWM7 567 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 SLC26A11Q86WA9 606 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 PDIK1LQ8N165 341 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 AGGF1Q8N302 714 aaeCLIP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 ARHGEF39Q8N4T4 335 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 KCT2Q8NC54 265 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 ZCCHC10Q8TBK6 192 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 ATL1Q8WXF7 558 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NR4A3Q92570 626 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 TM4SF19Q96DZ7 209 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 COPG2Q9UBF2 871 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 SUCOQ9UBS9 1254 aaKnown RBP10.07□□□□□ -0.8
CAPN3-202ENST00000337571 SEC14L3Q9UDX4 400 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 VWA7Q9Y334 891 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 NAALAD2Q9Y3Q0 740 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 SLC22A7Q9Y694 548 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 HIVEP3Q5T1R4 2406 aa10.07□□□□□ -0.8
CAPN3-202ENST00000337571 CPAMD8Q8IZJ3 1885 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 TRGV8A0A0C4DH27 118 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 CES2O00748 559 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 DNALI1O14645 258 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 LCMT2O60294 686 aaKnown RBP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 ZG16O60844 167 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 UNC5CO95185 931 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 MLYCDO95822 493 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 CDH1P12830 882 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 CDKN2DP55273 166 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 AP1S2P56377 157 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 KCNK10P57789 538 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 TAS2R50P59544 299 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 MEP1AQ16819 746 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 ACER2Q5QJU3 275 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 DUPD1Q68J44 220 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 SP5Q6BEB4 398 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-202ENST00000337571 LANCL3Q6ZV70 420 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 VN1R4Q7Z5H5 301 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 ANKRD37Q7Z713 158 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 HORMAD2Q8N7B1 307 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 GPATCH11Q8N954 259 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 MFSD9Q8NBP5 474 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 M1APQ8TC57 530 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 CERS2Q96G23 380 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 SNF8Q96H20 258 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 PEX11GQ96HA9 241 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 TAAR6Q96RI8 345 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 LPAR4Q99677 370 aa10.06□□□□□ -0.8
CAPN3-202ENST00000337571 UTP23Q9BRU9 249 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms