RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 POM121L1PQ3SYA9 428 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 GPR33Q49SQ1 333 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 SERPINA13PQ6UXR4 307 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 NPAS4Q8IUM7 802 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 TM9SF3Q9HD45 589 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 IL1RAPQ9NPH3 570 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 SERHLQ9NQF3 203 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 RNF186Q9NXI6 227 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 EFCAB9A8MZ26 197 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 M0QX08 132 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 INPPL1O15357 1258 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 POU2F1P14859 743 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 GJA1P17302 382 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 TNFRSF1BP20333 461 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 FPR1P21462 350 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 NRIP1P48552 1158 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 DMC1Q14565 340 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZFP69Q49AA0 526 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 CYP27C1Q4G0S4 372 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 DCAF4L2Q8NA75 395 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 VPS37AQ8NEZ2 397 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 USP7Q93009 1102 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 KLF16Q9BXK1 252 aaPredicted RBP15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZDHHC3Q9NYG2 299 aa15.97■□□□□ 0.15
CDC42EP4-201ENST00000335793 TMEM88BA6NKF7 163 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 CENPXA8MT69 81 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 GAPDHSO14556 408 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 SLC16A6O15403 523 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 MTRF1O75570 445 aaKnown RBP15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 NUDT7P0C024 238 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 PBLDP30039 288 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 SREBF2Q12772 1141 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 CBX2Q14781 532 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 USP45Q70EL2 814 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 VRK3Q8IV63 474 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 COPS4Q9BT78 406 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 TPT1P8Q9HAU6 139 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 CLEC4EQ9ULY5 219 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 LAMA2P24043 3122 aaKnown RBP15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 SUV39H1O43463 412 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 SH3BP5O60239 455 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 CYP4F8P98187 520 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 IL18R1Q13478 541 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 NAE1Q13564 534 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 DUOXA1Q1HG43 343 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 KIAA1614Q5VZ46 1190 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 CRTC1Q6UUV9 634 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 MACC1Q6ZN28 852 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZNF461Q8TAF7 563 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 RAET1EQ8TD07 263 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 SCAMP4Q969E2 229 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 KCNN3Q9UGI6 736 aa15.96■□□□□ 0.15
CDC42EP4-201ENST00000335793 AP3D1O14617 1153 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 RGS13O14921 159 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZW10O43264 779 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CA12O43570 354 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SCO2O43819 266 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 GBAP04062 536 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PRPS1L1P21108 318 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CBLP22681 906 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 POU1F1P28069 291 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 DGKEP52429 567 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZNF648Q5T619 568 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PROX1Q92786 737 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 TP53INP1Q96A56 240 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CMTM7Q96FZ5 175 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 P2RY13Q9BPV8 354 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CLSTN3Q9BQT9 956 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ALOXE3Q9BYJ1 711 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 TEKT2Q9UIF3 430 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 FZD4Q9ULV1 537 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CPNE3O75131 537 aaKnown RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 LAMP1P11279 417 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ALOX12P18054 663 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PCMT1P22061 227 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 HOXD10P28358 340 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 C21orf33P30042 268 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 RRM2P31350 389 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 OR1E2P47887 323 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CREMQ03060 361 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 HKDC1Q2TB90 917 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SYTL3Q4VX76 610 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 TMEM169Q96HH4 297 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CWH43Q9H720 699 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SP140LQ9H930 580 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 IMPAD1Q9NX62 359 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CFAP97Q9P2B7 532 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ATP6V1G2-DDX39BF2Z307 99 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 AIREO43918 545 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PQBP1O60828 265 aaKnown RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CTSOP43234 321 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SLC9A3P48764 834 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PRIM2P49643 509 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 EPHB3P54753 998 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SNRPD1P62314 119 aaKnown RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 NPRL3Q12980 569 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 ACOX1Q15067 660 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 DGKKQ5KSL6 1271 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 TUBA3EQ6PEY2 450 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 STX19Q8N4C7 294 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms