RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MSTO1Q9BUK6 570 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FRMD8P1Q9BZ68 369 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TRIM2Q9C040 744 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZYG11BQ9C0D3 744 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WNT10AQ9GZT5 417 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 BCO1Q9HAY6 547 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 AASDHPPTQ9NRN7 309 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 OPTCQ9UBM4 332 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DNAJB9Q9UBS3 223 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NOL7Q9UMY1 257 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SNX7Q9UNH6 387 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LRCH1Q9Y2L9 728 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TCAF1Q9Y4C2 921 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1W2PQD3 144 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 K7EM74 188 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 M0R3H8 397 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PDLIM1O00151 329 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 RRP9O43818 475 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SLC37A4O43826 429 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ANGPTL7O43827 346 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 F13A1P00488 732 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 C1QAP02745 245 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 LTFP02788 710 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 MPC1LP0DKB6 136 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TMIGD3P0DMS9 266 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF16P17020 682 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 AKAP5P24588 427 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CYP2F1P24903 491 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ACADLP28330 430 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SERPINA4P29622 427 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 HNRNPFP52597 415 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CASP9P55211 416 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TRA2BP62995 288 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TNNC1P63316 161 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SPTBN1Q01082 2364 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SPIBQ01892 262 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TUBB3Q13509 450 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PDE1CQ14123 709 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 LPAL2Q16609 132 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 QPCTQ16769 361 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ARL13AQ5H913 290 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FAM120AOSQ5T036 256 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FAXCQ5TGI0 409 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 LRIG3Q6UXM1 1119 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 Q6ZPA2 131 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TRAPPC11Q7Z392 1133 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CHD1LQ86WJ1 897 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CAMK1DQ8IU85 385 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 MFN1Q8IWA4 741 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 Q8N1X5 172 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ASCC3Q8N3C0 2202 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CELF2-AS1Q8N7Q2 184 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PNPLA1Q8N8W4 532 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BBOF1Q8ND07 529 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TTC8Q8TAM2 541 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PIWIL2Q8TC59 973 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FAM110BQ8TC76 370 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SNX21Q969T3 373 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 INTS4Q96HW7 963 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GMPPAQ96IJ6 420 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 WDR24Q96S15 920 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SEPT5Q99719 369 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BEX2Q9BXY8 128 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TRIM55Q9BYV6 548 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 DNTTIP1Q9H147 329 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SUV39H2Q9H5I1 410 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PLAC1Q9HBJ0 212 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PNPLA3Q9NST1 481 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 NTMQ9P121 344 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SLCO3A1Q9UIG8 710 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FER1L5A0AVI2 2057 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TEX13CA0A0J9YWL9 993 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GOLGA6L10A0A0M3HER8 536 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1W2PQH9 124 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 HTR3EA5X5Y0 456 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GOLGA6L10A6NI86 522 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GOLGA6L19H0YKK7 550 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FOXE1O00358 373 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 HCRTR1O43613 425 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 NRP2O60462 931 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZG16O60844 167 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SKAP2O75563 359 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SCRG1O75711 98 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 AQP8O94778 261 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PRPF6O94906 941 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PGLSO95336 258 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PLEKHA8P1O95397 391 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PNPP00491 289 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ALDOBP05062 364 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ALOX5P09917 674 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PKMP14618 531 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF708P17019 499 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF7P17097 686 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TNNI3P19429 210 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PTGS1P23219 599 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CRHR1P34998 444 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BSGP35613 385 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 AHRP35869 848 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms