RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CLDN9O95484 217 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 BPGMP07738 259 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 ARL1P40616 181 aaPredicted RBP24.74■■□□□ 1.55
SMDT1-201ENST00000331479 CCR10P46092 362 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 SERPINB4P48594 390 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 GPS2Q13227 327 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 VN1R5Q7Z5H4 357 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 DTX1Q86Y01 620 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 OR4F6Q8NGB9 312 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 CLIP3Q96DZ5 547 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 PKNOX2Q96KN3 472 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 C10orf90Q96M02 699 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 NDC1Q9BTX1 674 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 GATA5Q9BWX5 397 aaPredicted RBP24.74■■□□□ 1.55
SMDT1-201ENST00000331479 SLC7A5P2Q9GIP4 190 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 AKIRIN1Q9H9L7 192 aaPredicted RBP24.74■■□□□ 1.55
SMDT1-201ENST00000331479 CUTCQ9NTM9 273 aa24.74■■□□□ 1.55
SMDT1-201ENST00000331479 CHD8Q9HCK8 2581 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 SERPIND1P05546 499 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 DHRS4L1P0CG22 281 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 RORAP35398 523 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 HNF4AP41235 474 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 TGIF1Q15583 401 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 CPSF6Q16630 551 aaKnown RBP eCLIP24.73■■□□□ 1.55
SMDT1-201ENST00000331479 HIST2H2ACQ16777 129 aaPredicted RBP24.73■■□□□ 1.55
SMDT1-201ENST00000331479 C1orf189Q5VU69 101 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 HIST2H2AA3Q6FI13 130 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 RHBDD2Q6NTF9 364 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 LETMD1Q6P1Q0 360 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 MED27Q6P2C8 311 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 TTLL10Q6ZVT0 673 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 MILR1Q7Z6M3 343 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 GOLGA6L1Q8N7Z2 621 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 ANKRD42Q8N9B4 389 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 TTC29Q8NA56 475 aaPredicted RBP24.73■■□□□ 1.55
SMDT1-201ENST00000331479 KCT2Q8NC54 265 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 CAMKVQ8NCB2 501 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 CREB3L4Q8TEY5 395 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 LAMA5O15230 3695 aa24.73■■□□□ 1.55
SMDT1-201ENST00000331479 UBFD1O14562 309 aaKnown RBP24.72■■□□□ 1.55
SMDT1-201ENST00000331479 OTCP00480 354 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 CFAP157Q5JU67 520 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 C6orf15Q6UXA7 325 aaPredicted RBP24.72■■□□□ 1.55
SMDT1-201ENST00000331479 FRMD7Q6ZUT3 714 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 LAS2Q8IYD9 372 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 OR7G3Q8NG95 312 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 RHBGQ9H310 441 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 SRPK3Q9UPE1 567 aa24.72■■□□□ 1.55
SMDT1-201ENST00000331479 MRPS2Q9Y399 296 aaKnown RBP24.72■■□□□ 1.55
SMDT1-201ENST00000331479 WDR91A4D1P6 747 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TXNDC9O14530 226 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TBX6O95947 436 aaPredicted RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 ALAS2P22557 587 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 ARSFP54793 590 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 PCBP4P57723 403 aaKnown RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 HYAL2Q12891 473 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 LCP2Q13094 533 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 PWP1Q13610 501 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 FAM214AQ32MH5 1076 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 ZCCHC23Q6ZST2 131 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 SYVN1Q86TM6 617 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NLGN4XQ8N0W4 816 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TRPV3Q8NET8 790 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NLGN4YQ8NFZ3 816 aaPredicted RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 SNIP1Q8TAD8 396 aaKnown RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NT5CQ8TCD5 201 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NAF1Q96HR8 494 aaKnown RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 LRFN5Q96NI6 719 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 ZNF382Q96SR6 550 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 AICDAQ9GZX7 198 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 AHCTF1Q8WYP5 2266 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 MEN1O00255 615 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 RAD1O60671 282 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 MLYCDO95822 493 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 HBQ1P09105 142 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 SLC35G6P0C7Q6 338 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 PCNAP12004 261 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 WDR4P57081 412 aaKnown RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 ZNF385CQ66K41 422 aaPredicted RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 LCN10Q6JVE6 187 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TMEM214Q6NUQ4 689 aaKnown RBP24.71■■□□□ 1.55
SMDT1-201ENST00000331479 DSELQ8IZU8 1212 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 RNF175Q8N4F7 328 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TTLQ8NG68 377 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NKD1Q969G9 470 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 GBP5Q96PP8 586 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 NLNQ9BYT8 704 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 TXLNGQ9NUQ3 528 aa24.71■■□□□ 1.55
SMDT1-201ENST00000331479 FER1L5A0AVI2 2057 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 ANKDD1BA6NHY2 528 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 H0YIV9 168 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 OR4F21O95013 312 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 LIPCP11150 499 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 ITGAXP20702 1163 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 SLC18A1P54219 525 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 EMP3P54852 163 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 ZRSR2Q15696 482 aaKnown RBP24.7■■□□□ 1.54
SMDT1-201ENST00000331479 GGTA1PQ4G0N0 100 aa24.7■■□□□ 1.54
SMDT1-201ENST00000331479 YOD1Q5VVQ6 348 aaPredicted RBP24.7■■□□□ 1.54
SMDT1-201ENST00000331479 FAM199XQ6PEV8 388 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms