RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SNX6Q9UNH7 406 aa9.13□□□□□ -0.95
C11orf54-201ENST00000331239 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
C11orf54-201ENST00000331239 GON4LQ3T8J9 2241 aa9.13□□□□□ -0.95
C11orf54-201ENST00000331239 PRSS51A0A1B0GVH4 220 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 NCF1BA6NI72 391 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 NCF1CA8MVU1 366 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 AZIN1O14977 448 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 KRT6AP02538 564 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 KRT6BP04259 564 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 MSL3P1P0C860 447 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 HGFP14210 728 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 NCF1P14598 390 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 MSX2P35548 267 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 GRK3P35626 688 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PIK3CBP42338 1070 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 KRT6CP48668 564 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 AGTR2P50052 363 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PSME3P61289 254 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 MS4A2Q01362 244 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ROR2Q01974 943 aaKnown RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TRAF3Q13114 568 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 STX5Q13190 355 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 FASTKQ14296 549 aaKnown RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PLCL1Q15111 1095 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ZXDCQ2QGD7 858 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 CCSMST1Q4G0I0 132 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 KANK2Q63ZY3 851 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 UGT2A3Q6UWM9 527 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PLXDC1Q8IUK5 500 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SLC35F3Q8IY50 421 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 LAS2Q8IYD9 372 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 MARVELD2Q8N4S9 558 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SNX31Q8N9S9 440 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 LINC01555Q8NAE3 123 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 OR2A1Q8NGT9 310 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 APOLD1Q96LR9 279 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 AIF1LQ9BQI0 150 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 RHBGQ9H310 441 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 NOL11Q9H8H0 719 aaKnown RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 BRF2Q9HAW0 419 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TNFRSF12AQ9NP84 129 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TMEM45AQ9NWC5 275 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 LRIT1Q9P2V4 623 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SUCOQ9UBS9 1254 aaKnown RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 POMT2Q9UKY4 750 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SLC22A14Q9Y267 594 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TRAF6Q9Y4K3 522 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 DMDP11532 3685 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 LNP1A1A4G5 178 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TMX2-CTNND1H3BSU7 103 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PSMD12O00232 456 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 FOXE1O00358 373 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 DLL1O00548 723 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 OR7A17O14581 309 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ACOT8O14734 319 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 UBDO15205 165 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PPM1DO15297 605 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 DUX1O43812 170 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SIX3O95343 332 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 C9P02748 559 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PROS1P07225 676 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ACPPP15309 386 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 AHRP35869 848 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 E2F1Q01094 437 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 IRF8Q02556 426 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PRKG2Q13237 762 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SPATA24Q86W54 205 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ADCY4Q8NFM4 1077 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 BAHD1Q8TBE0 780 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ZFAND2BQ8WV99 257 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ATP6V1E2Q96A05 226 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ASB9Q96DX5 294 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 TRIM4Q9C037 500 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 COPS7BQ9H9Q2 264 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ADA2Q9NZK5 511 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 CFAP20Q9Y6A4 193 aaKnown RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 ADAMTS9Q9P2N4 1935 aa9.12□□□□□ -0.95
C11orf54-201ENST00000331239 MN1Q10571 1320 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-201ENST00000331239 A0A0J9YY10 115 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 TRBC2A0A5B9 178 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 PATE3B3GLJ2 98 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 DENRO43583 198 aaKnown RBP9.11□□□□□ -0.95
C11orf54-201ENST00000331239 SIGLEC6O43699 453 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 ANKRD34CP0C6C1 535 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 CKMT2P17540 419 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 PRPH2P23942 346 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 POLE2P56282 527 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 TRA2AQ13595 282 aaKnown RBP eCLIP9.11□□□□□ -0.95
C11orf54-201ENST00000331239 TLR1Q15399 786 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 RBBP7Q16576 425 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 REP15Q6BDI9 236 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 ZNF425Q6IV72 752 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 SPESP1Q6UW49 350 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 RPS27LQ71UM5 84 aaKnown RBP9.11□□□□□ -0.95
C11orf54-201ENST00000331239 PRSS42Q7Z5A4 293 aa9.11□□□□□ -0.95
C11orf54-201ENST00000331239 GLRX5Q86SX6 157 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms