RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 C9orf66Q5T8R8 295 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 FAM43BQ6ZT52 329 aaPredicted RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 SLC24A5Q71RS6 500 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 ANKRD23Q86SG2 305 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 MINDY1Q8N5J2 469 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 NOA1Q8NC60 698 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 C11orf52Q96A22 123 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 ZMAT2Q96NC0 199 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 MGME1Q9BQP7 344 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 UBAC1Q9BSL1 405 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 MXD3Q9BW11 206 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 TEX12Q9BXU0 123 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 MRPL1Q9BYD6 325 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 RSPH9Q9H1X1 276 aaPredicted RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 ZCCHC17Q9NP64 241 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PRMT7Q9NVM4 692 aaPredicted RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 GDE1Q9NZC3 331 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PCDHGB4Q9UN71 923 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 RSF1Q96T23 1441 aaPredicted RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 A0A1W2PPK0 400 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 hCG_1807616A0A1W2PRN6 198 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MTMR11A4FU01 709 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CDX4O14627 284 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 HAT1O14929 419 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 STARD3NLO95772 234 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 VDRP11473 427 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 ATP6V1B1P15313 513 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 ALOX12P18054 663 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 ELK3P41970 407 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MATR3P43243 847 aaKnown RBP eCLIP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 LHX1P48742 406 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 STAT2P52630 851 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CLNS1AP54105 237 aaKnown RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 NAP1L1P55209 391 aaKnown RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CLDN15P56746 228 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 OR1D5P58170 312 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 PSMC6P62333 389 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 IFI35P80217 286 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MC1RQ01726 317 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 ROR1Q01973 937 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CREB5Q02930 508 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CUL4AQ13619 759 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 BAATQ14032 418 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 SNAPC1Q16533 368 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 TMEM266Q2M3C6 531 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CFAP58Q5T655 872 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MFSD4BQ5TF39 518 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 TMUB2Q71RG4 321 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 SZRD1Q7Z422 152 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 RPAP2Q8IXW5 612 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 RCOR2Q8IZ40 523 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 SLC22A15Q8IZD6 547 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MAML2Q8IZL2 1156 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CCDC185Q8N715 623 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CFAP61Q8NHU2 1237 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 MOB3AQ96BX8 217 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 NSUN4Q96CB9 384 aaKnown RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 NXNL1Q96CM4 212 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 HNRNPABQ99729 332 aaKnown RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 SLF1Q9BQI6 1058 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 RBM24Q9BX46 236 aaKnown RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 TEX13BQ9BXU2 312 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 CCDC68Q9H2F9 335 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 GIMAP4Q9NUV9 329 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 ZNF215Q9UL58 517 aaPredicted RBP2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 SLC6A5Q9Y345 797 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 RPGRIP1LQ68CZ1 1315 aa2.12□□□□□ -2.07
CBX3P1-201ENST00000325243 POGZQ7Z3K3 1410 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 IGHV3-16A0A0C4DH30 117 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 H0Y9J4 135 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 PTGESO14684 152 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 CYTIPO60759 359 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 MTRF1O75570 445 aaKnown RBP2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 FAM200BP0CF97 657 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 SAGP10523 405 aaPredicted RBP2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 EPCAMP16422 314 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 IL11P20809 199 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 PTMSP20962 102 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 GCH1P30793 250 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 SRPXP78539 464 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 SIX1Q15475 284 aaPredicted RBP2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 NPTX1Q15818 432 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 ZNF79Q15937 498 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 ATP1A1-AS1Q5TC04 95 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 SLC30A6Q6NXT4 461 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 RPUSD3Q6P087 351 aaKnown RBP2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 RASGEF1AQ8N9B8 481 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 AVL9Q8NBF6 648 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 CCDC191Q8NCU4 936 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 RADILQ96JH8 1075 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 TIGD1Q96MW7 591 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 TXLNGYQ9BZA5 131 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 PRRG4Q9BZD6 226 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 CDH20Q9HBT6 801 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 TBC1D13Q9NVG8 400 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 HACD3Q9P035 362 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 RPS6KA6Q9UK32 745 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 MRPS18CQ9Y3D5 142 aaKnown RBP2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 FER1L5A0AVI2 2057 aa2.11□□□□□ -2.07
CBX3P1-201ENST00000325243 A0A1W2PPM1 405 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms