RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GPD2P43304 727 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CHRNA4P43681 627 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ERVK-25P63136 954 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DACT2Q5SW24 774 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 VSIG10LQ86VR7 867 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 RASGRP3Q8IV61 690 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF101Q8IZC7 436 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SAMD12Q8N8I0 201 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ERVK-18Q9QC07 812 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CPED1A4D0V7 1026 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 LRRC10BA6NIK2 292 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF726A6NNF4 738 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GDF10P55107 478 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GPC2Q8N158 579 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MKL1Q969V6 931 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 HSH2DQ96JZ2 352 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF347Q96SE7 839 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 WDR77Q9BQA1 342 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 ERVK13-1Q9NX77 482 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PCDHGA8Q9Y5G5 932 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 FAM234BA2RU67 622 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CYP17A1P05093 508 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MRPL3P09001 348 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 RAP2AP10114 183 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PEPDP12955 493 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PVALBP20472 110 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 DNASE1P24855 282 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CCND3P30281 292 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 SLC35F1Q5T1Q4 408 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 LIPKQ5VXJ0 399 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 POTEHQ6S545 545 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 BEND7Q8N7W2 519 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 SLC38A4Q969I6 547 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 NDUFAF4Q9P032 175 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MAB21L2Q9Y586 359 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DEPDC5O75140 1603 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 NDUFS4O43181 175 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 TLX3O43711 291 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 ECI2O75521 394 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 KAT7O95251 611 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ALDH3B1P43353 468 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 LCP2Q13094 533 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PARP15Q460N3 678 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF404Q494X3 552 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CRB2Q5IJ48 1285 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GTF2IRD2BQ6EKJ0 949 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PRSS55Q6UWB4 352 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 GTF2IRD2Q86UP8 949 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SDCBP2Q9H190 292 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ANKHQ9HCJ1 492 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF223Q9UK11 482 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 NOX1Q9Y5S8 564 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 CLCA1A8K7I4 914 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MAGEB17A8MXT2 336 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 NUPL2O15504 423 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 TREHO43280 583 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PCDH7O60245 1069 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MMP3P08254 477 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GNRHRP30968 328 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CRYBB1P53674 252 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 SP2Q02086 613 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 TREX2Q9BQ50 279 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 SPATA7Q9P0W8 599 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DNAJB9Q9UBS3 223 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MGAT4BQ9UQ53 548 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CHD3Q12873 2000 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 CLDN11O75508 207 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 LCKP06239 509 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 HCKP08631 526 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CDKN2BP42772 138 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 BDKRB1P46663 353 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 AP1S1P61966 158 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ID2Q02363 134 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GPR139Q6DWJ6 353 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DOK4Q8TEW6 326 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 AKTIPQ9H8T0 292 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 USP31Q70CQ4 1352 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 A0A0U1RQK1 487 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 ACP5P13686 325 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 NFKB2Q00653 900 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 UBXN2BQ14CS0 331 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 PSMG2Q969U7 264 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 BIRC7Q96CA5 298 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 KCNS2Q9ULS6 477 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 M0R233 179 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 NUAK1O60285 661 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 KCNJ13O60928 360 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 ZNF35P13682 527 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 E2F1Q01094 437 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 MOGSQ13724 837 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 RAB39AQ14964 217 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 ZNF792Q3KQV3 632 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 PSD4Q8NDX1 1056 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 TBC1D15Q8TC07 691 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 ARL6Q9H0F7 186 aa7.68□□□□□ -1.18
CIITA-201ENST00000324288 FAM83DQ9H4H8 585 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms