RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CDK4P11802 303 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 NELFEP18615 380 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 CSRP1P21291 193 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 PTX3P26022 381 aaPredicted RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 GABRA4P48169 554 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 HSD11B2P80365 405 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 CUL3Q13618 768 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SMU1Q2TAY7 513 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SGO1Q5FBB7 561 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 VWA5B1Q5TIE3 1220 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 GKAP1Q5VSY0 366 aaPredicted RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 ADNP2Q6IQ32 1131 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SCIMPQ6UWF3 145 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 Q6ZSR9 355 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 ARHGAP22Q7Z5H3 698 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 D2HGDHQ8N465 521 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 NETO1Q8TDF5 533 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 BCAS4Q8TDM0 211 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 CREB3L4Q8TEY5 395 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 TM4SF19Q96DZ7 209 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 CMTM7Q96FZ5 175 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 MTERF1Q99551 399 aaKnown RBP13.01□□□□□ -0.33
PRPF18-201ENST00000320054 SERPINI1Q99574 410 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 MS4A8Q9BY19 250 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 ENAMQ9NRM1 1142 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 NMRK1Q9NWW6 199 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 PTGDR2Q9Y5Y4 395 aa13.01□□□□□ -0.33
PRPF18-201ENST00000320054 A0A0J9YVX5 310 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 NDUFAB1O14561 156 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 SRPX2O60687 465 aaPredicted RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 PRAMEF10O60809 474 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 RSL1D1O76021 490 aaKnown RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 SERPINA6P08185 405 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 PRR35P0CG20 571 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 EPHA3P29320 983 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 MLLT3P42568 568 aaPredicted RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 ARFIP1P53367 373 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 RPS13P62277 151 aaKnown RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 CYP4F3Q08477 520 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 PWP1Q13610 501 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 TRIP6Q15654 476 aaKnown RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 IMPG1Q17R60 797 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ADPRMQ3LIE5 342 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 MANEAQ5SRI9 462 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 TMTC4Q5T4D3 741 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ACAD11Q709F0 780 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.33
PRPF18-201ENST00000320054 VN1R4Q7Z5H5 301 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ASPGQ86U10 573 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 MCATQ8IVS2 390 aaKnown RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 CAMKVQ8NCB2 501 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 CEP70Q8NHQ1 597 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 NT5CQ8TCD5 201 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 TUBGCP3Q96CW5 907 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 PPP3R2Q96LZ3 170 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ZNF285Q96NJ3 590 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 HBEGFQ99075 208 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ACPTQ9BZG2 426 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 RABEP2Q9H5N1 569 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 WDR55Q9H6Y2 383 aaPredicted RBP13□□□□□ -0.33
PRPF18-201ENST00000320054 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 SYNPO2LQ9H987 977 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 TCF7L2Q9NQB0 619 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 TOR4AQ9NXH8 423 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 VPS29Q9UBQ0 182 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 PLCL2Q9UPR0 1127 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
PRPF18-201ENST00000320054 ATP6AP2A0A1C7CYW4 349 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 H0YGG7 62 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TXNDC9O14530 226 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TM4SF5O14894 197 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
PRPF18-201ENST00000320054 GFRA3O60609 400 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ATP6AP2O75787 350 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SEMA3DO95025 777 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SLC35G6P0C7Q6 338 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SPTBP11277 2137 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ARL4DP49703 201 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ARF3P61204 181 aaPredicted RBP12.99□□□□□ -0.33
PRPF18-201ENST00000320054 CYP4F2P78329 520 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 HMGCS1Q01581 520 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TUBB3Q13509 450 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ATP6AP1LQ52LC2 224 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TMEM35AQ53FP2 167 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SNAP47Q5SQN1 464 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 DEPDC1Q5TB30 811 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms