RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LAMA3Q16787 3333 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 J3KTA2 159 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SLC25A14O95258 325 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 EPOP01588 193 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 FEN1P39748 380 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 IL12RB1P42701 662 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 OR3A3P47888 321 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 PPIGQ13427 754 aaKnown RBP eCLIP9.33□□□□□ -0.921e-7■■□□□ 12.2
PTPRA-202ENST00000318266 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 AGMOQ6ZNB7 445 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 DPY19L3Q6ZPD9 716 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 YIPF7Q8N8F6 280 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 ZNF557Q8N988 423 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 OR6K2Q8NGY2 324 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 TRMT61AQ96FX7 289 aaKnown RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 SLC39A13Q96H72 371 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 FAM126AQ9BYI3 521 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CD244Q9BZW8 370 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 KATNBL1Q9H079 304 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 MARCH2Q9P0N8 246 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 RHCGQ9UBD6 479 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CLEC2DQ9UHP7 191 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 RAI2Q9Y5P3 530 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 CLCA3PQ9Y6N3 262 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 LOC285556D6RIA3 1793 aa9.33□□□□□ -0.92
PTPRA-202ENST00000318266 MAGEB17A8MXT2 336 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 FAM227AF5H4B4 570 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 SUV39H1O43463 412 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 ALPIP09923 528 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 KCNQ1P51787 676 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 CLDN8P56748 225 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 RPS24P62847 133 aaKnown RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 EFR3AQ14156 821 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 DSC3Q14574 896 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 BTBD16Q32M84 506 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 LDLRAD1Q5T700 205 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 EIF3MQ7L2H7 374 aaKnown RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 LGI4Q8N135 537 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 COPS8Q99627 209 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 TLR8Q9NR97 1041 aaKnown RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 DHRS7Q9Y394 339 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 PRSS21Q9Y6M0 314 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 INSIG1O15503 277 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 MRPS14O60783 128 aaKnown RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 COX7A2P14406 83 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 CRYBB1P53674 252 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 OLR1P78380 273 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 RUNX1T1Q06455 604 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 SCN1BQ07699 218 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 HYAL2Q12891 473 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 NFE2L1Q14494 772 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 VEPH1Q14D04 833 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 CCDC85BQ15834 202 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-202ENST00000318266 EXOC3L2Q2M3D2 409 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 FBXO43Q4G163 708 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 PDZK1Q5T2W1 519 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 SLC34A3Q8N130 599 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 DEDD2Q8WXF8 326 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 NELL1Q92832 810 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 SH3KBP1Q96B97 665 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 CCDC120Q96HB5 630 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 ACOXLQ9NUZ1 547 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 PCDHB9Q9Y5E1 797 aa9.32□□□□□ -0.92
PTPRA-202ENST00000318266 MBLAC1A4D2B0 266 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 LRRTM2O43300 516 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ZNF780AO75290 641 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 UGT2B17O75795 530 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KRT6AP02538 564 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KRT6BP04259 564 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CLEC2LP0C7M8 214 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 IL1RNP18510 177 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CD72P21854 359 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CRYBA2P53672 197 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CCL23P55773 120 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CSNK2BP67870 215 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 UAP1L1Q3KQV9 507 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CBLL1Q75N03 491 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 VN1R5Q7Z5H4 357 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 BCDIN3DQ7Z5W3 292 aaKnown RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SYT12Q8IV01 421 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 THEM5Q8N1Q8 247 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ATAD1Q8NBU5 361 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FLCNQ8NFG4 579 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ENKURQ8TC29 256 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 RASSF5Q8WWW0 418 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 DIRAS2Q96HU8 199 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 C7orf34Q96L11 122 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FRMD6Q96NE9 622 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SLC22A4Q9H015 551 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms