RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
SPAST-201ENST00000315285 L3HYPDHQ96EM0 354 aa13.35□□□□□ -0.27
SPAST-201ENST00000315285 TRNT1Q96Q11 434 aaKnown RBP13.35□□□□□ -0.27
SPAST-201ENST00000315285 AKAP8O43823 692 aaKnown RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 PRMT3O60678 531 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 PDYNP01213 254 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 ACRV1P26436 265 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 GCAP28676 217 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SLC15A1P46059 708 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 TMBIM6P55061 237 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 VBP1P61758 197 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 GALNT1Q10472 559 aaPredicted RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 LY6G5CQ5SRR4 150 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 MND1Q9BWT6 205 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SMG9Q9H0W8 520 aaKnown RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 KCNK13Q9HB14 408 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 NFKBIL1Q9UBC1 381 aaPredicted RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 EDDM13A0A1B0GTR0 161 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SOX14O95416 240 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 ITGB1P05556 798 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 PSKH1P11801 424 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SLC6A4P31645 630 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 GPR68Q15743 365 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 COQ5Q5HYK3 327 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SLC25A24Q6NUK1 477 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 GAL3ST4Q96RP7 486 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 CNOT11Q9UKZ1 510 aaKnown RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 C4BP0C0L5 1744 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 MAGEB3O15480 346 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 HPRP00739 348 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 TMEM115Q12893 351 aaPredicted RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 LIPJQ5W064 366 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 KANK2Q63ZY3 851 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 TUBA3EQ6PEY2 450 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 RNF31Q96EP0 1072 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 TRIB3Q96RU7 358 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SORT1Q99523 831 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 DSN1Q9H410 356 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 IGSF5Q9NSI5 407 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 REM1O75628 298 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 CHRNA1P02708 482 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 IFNA6P05013 189 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 HSD17B1P14061 328 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 ZNF8P17098 575 aaPredicted RBP13.34□□□□□ -0.27
SPAST-201ENST00000315285 VMACQ2NL98 169 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 REEP3Q6NUK4 255 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 DCUN1D3Q8IWE4 304 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 OR8H1Q8NGG4 311 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 REEP4Q9H6H4 257 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SLC35C2Q9NQQ7 365 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 SMOXQ9NWM0 555 aa13.34□□□□□ -0.27
SPAST-201ENST00000315285 ZNF840PA6NDX5 716 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 FAM170BA6NMN3 283 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 GNB5O14775 395 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.27
SPAST-201ENST00000315285 AGR2O95994 175 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.27
SPAST-201ENST00000315285 TEAD2Q15562 447 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 MARCH9Q86YJ5 346 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.27
SPAST-201ENST00000315285 KCT2Q8NC54 265 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 PJA1Q8NG27 643 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 OR6K6Q8NGW6 343 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 CNIH3Q8TBE1 160 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 RIPOR3Q96MK2 946 aa13.33□□□□□ -0.27
SPAST-201ENST00000315285 WDR6Q9NNW5 1121 aaKnown RBP13.33□□□□□ -0.27
SPAST-201ENST00000315285 SOCS2O14508 198 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 STC2O76061 302 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 NDUFS1P28331 727 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 OR1E2P47887 323 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 CSTF1Q05048 431 aaKnown RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 C2orf27AQ580R0 203 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 LCN8Q6JVE9 175 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 GSDMCQ9BYG8 508 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 STATHP02808 62 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 HSF2Q03933 536 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 TNFAIP8L1Q8WVP5 186 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 MKKSQ9NPJ1 570 aaPredicted RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 RHCGQ9UBD6 479 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 TNFRSF10DQ9UBN6 386 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 INSL6Q9Y581 213 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 KRT33AO76009 404 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 CD72P21854 359 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 STK19P49842 368 aaPredicted RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 PGDP52209 483 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 RPS3AP61247 264 aaKnown RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 LMAN2Q12907 356 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms