RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 FPGSQ05932 587 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■□□ 15.6
MKS1-201ENST00000313863 TAF12Q16514 161 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 IFI44LQ53G44 452 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 PRSS36Q5K4E3 855 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CAMKMTQ7Z624 323 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 METTL4Q8N3J2 472 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SPPL2AQ8TCT8 520 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ERLEC1Q96DZ1 483 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ASIC4Q96FT7 647 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 TMEM175Q9BSA9 504 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 NUAK2Q9H093 628 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CHST8Q9H2A9 424 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 PDZK1P1A8MUH7 402 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 RGS13O14921 159 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 IFNA14P01570 189 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ADORA3P0DMS8 318 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 IRF3Q14653 427 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 RGNQ15493 299 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 DESI1Q6ICB0 168 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ZNF544Q6NX49 715 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CCBE1Q6UXH8 406 aaPredicted RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 FAM124AQ86V42 546 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 MMAAQ8IVH4 418 aaKnown RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ST13P5Q8NFI4 369 aaPredicted RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 SETD6Q8TBK2 473 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 ATL1Q8WXF7 558 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 BRF2Q9HAW0 419 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 CNOT2Q9NZN8 540 aaKnown RBP13.36□□□□□ -0.27
MKS1-201ENST00000313863 DUSP12Q9UNI6 340 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 GRIP1Q9Y3R0 1128 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 PCDHGA2Q9Y5H1 932 aa13.36□□□□□ -0.27
MKS1-201ENST00000313863 IGLV3-16A0A075B6K0 115 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 GFYI3L273 518 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 TLL1O43897 1013 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 HNF4AP41235 474 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 IDH2P48735 452 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 CDC42P60953 191 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 RBBP4Q09028 425 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 ST3GAL4Q11206 333 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 MICAQ29983 383 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 TPRG1Q6ZUI0 275 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 USP45Q70EL2 814 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 CLECL1Q8IZS7 167 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 GALNT6Q8NCL4 622 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 FAM83FQ8NEG4 500 aaPredicted RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
MKS1-201ENST00000313863 SH3KBP1Q96B97 665 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 TMCO6Q96DC7 493 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 OR2B2Q9GZK3 357 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 SPATA6Q9NWH7 488 aaPredicted RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 EHD3Q9NZN3 535 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 PCNTO95613 3336 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 A0A075B6Q4 140 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 PSMD11O00231 422 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 ZW10O43264 779 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 CCNKO75909 580 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 STSP08842 583 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 LAMP1P11279 417 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 GTF2E2P29084 291 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 PIK3CBP42338 1070 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 SPIBQ01892 262 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 HSPA14Q0VDF9 509 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 AGAP6Q5VW22 663 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 RSBN1Q5VWQ0 802 aaPredicted RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 SLC8B1Q6J4K2 584 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 SLC5A8Q8N695 610 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 GPR26Q8NDV2 337 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 CDC26Q8NHZ8 85 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 ALG14Q96F25 216 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 TRMT2BQ96GJ1 504 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 AGAP4Q96P64 663 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 MAPKAP1Q9BPZ7 522 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 CHCHD6Q9BRQ6 235 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 CDCA4Q9BXL8 241 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 C3orf14Q9HBI5 128 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 DYRK4Q9NR20 520 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 THSD1Q9NS62 852 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 NDUFAF4Q9P032 175 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 TRAPPC4Q9Y296 219 aa13.35□□□□□ -0.27
MKS1-201ENST00000313863 WBP11Q9Y2W2 641 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 RBMX2Q9Y388 322 aaKnown RBP13.35□□□□□ -0.27
MKS1-201ENST00000313863 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 C1orf226A1L170 272 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 HOXA2O43364 376 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 HMGA1P17096 107 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms