RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 H7BY64 318 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 YY2O15391 372 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 SRFP11831 508 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 FASP25445 335 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 HTR1BP28222 390 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 GZMMP51124 257 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 POLE2P56282 527 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 MED21Q13503 144 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 CCDC85BQ15834 202 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-201ENST00000309469 TPRG1LQ5T0D9 272 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 TMEM154Q6P9G4 183 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 ANKFN1Q8N957 763 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 OR52E1Q8NGJ3 308 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 PRAP1Q96NZ9 151 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 NT5DC2Q9H857 520 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 COQ10BQ9H8M1 238 aa20.41■□□□□ 0.86
ATG4D-201ENST00000309469 SCHIP1Q9P0W5 487 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-201ENST00000309469 EXO1Q9UQ84 846 aaKnown RBP20.41■□□□□ 0.86
ATG4D-201ENST00000309469 BRWD1Q9NSI6 2320 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 ANKDD1BA6NHY2 528 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 FAM220BPB1ANY3 271 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 GBAP04062 536 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 ZNF26P17031 533 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-201ENST00000309469 REEP5Q00765 189 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 FOLH1Q04609 750 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 MICU2Q8IYU8 434 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 PGBD3Q8N328 593 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 GALNT4Q8N4A0 578 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 ANKRD53Q8N9V6 530 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 FIG4Q92562 907 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 CXorf40BQ96DE9 158 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 FAM120BQ96EK7 910 aaKnown RBP20.4■□□□□ 0.86
ATG4D-201ENST00000309469 MYCBPQ99417 103 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-201ENST00000309469 PITHD1Q9GZP4 211 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-201ENST00000309469 AGPAT4Q9NRZ5 378 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 USP36Q9P275 1121 aaKnown RBP20.4■□□□□ 0.86
ATG4D-201ENST00000309469 ATP6V1HQ9UI12 483 aa20.4■□□□□ 0.86
ATG4D-201ENST00000309469 TPST1O60507 370 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 SMNDC1O75940 238 aaKnown RBP eCLIP20.39■□□□□ 0.86
ATG4D-201ENST00000309469 KLHL18O94889 574 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 SEMA4FO95754 770 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 KLK1P06870 262 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 FCGR1AP12314 374 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 AKT2P31751 481 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 PRDX1Q06830 199 aaKnown RBP20.39■□□□□ 0.86
ATG4D-201ENST00000309469 MAP7Q14244 749 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 ANXA8L1Q5VT79 327 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 Q6ZS52 159 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 ZNF621Q6ZSS3 439 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 RD3Q7Z3Z2 195 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 CLECL1Q8IZS7 167 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 VPS37AQ8NEZ2 397 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 OR2A1Q8NGT9 310 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 C16orf78Q8WTQ4 265 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 SNX19Q92543 992 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 TSACCQ96A04 125 aaPredicted RBP20.39■□□□□ 0.86
ATG4D-201ENST00000309469 REEP4Q9H6H4 257 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 POLMQ9NP87 494 aaPredicted RBP20.39■□□□□ 0.86
ATG4D-201ENST00000309469 TBC1D29Q9UFV1 150 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 SCOCQ9UIL1 159 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 ICKQ9UPZ9 632 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 ERVK-11Q9UQG0 969 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 PCDHB11Q9Y5F2 797 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 HEBP2Q9Y5Z4 205 aa20.39■□□□□ 0.86
ATG4D-201ENST00000309469 PRAMEF33A0A0G2JMD5 474 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 CPSF4O95639 269 aaKnown RBP20.39■□□□□ 0.85
ATG4D-201ENST00000309469 UBTFL6P0CB48 400 aaPredicted RBP20.39■□□□□ 0.85
ATG4D-201ENST00000309469 SERPINB1P30740 379 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 ABHD18Q0P651 414 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 TDGQ13569 410 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 SKIV2LQ15477 1246 aaKnown RBP20.39■□□□□ 0.85
ATG4D-201ENST00000309469 ABRAXAS1Q6UWZ7 409 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 SLC9B2Q86UD5 537 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 C10orf111Q8N326 155 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 SEPHS2Q99611 448 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 AHSPQ9NZD4 102 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 SH3BP4Q9P0V3 963 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 BTNL2Q9UIR0 455 aa20.39■□□□□ 0.85
ATG4D-201ENST00000309469 FEZF1A0PJY2 475 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 EVPLLA8MZ36 301 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 CXCR6O00574 342 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 MAN2B1O00754 1011 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 TXNDC9O14530 226 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 TNFRSF10CO14798 259 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 SCELO95171 688 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 TBX6O95947 436 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-201ENST00000309469 YPEL5P62699 121 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 PRKCQQ04759 706 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 DEPDC1Q5TB30 811 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 CROCCQ5TZA2 2017 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 CENPKQ9BS16 269 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 MS4A8Q9BY19 250 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 MYNNQ9NPC7 610 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 RAB26Q9ULW5 256 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 COLEC10Q9Y6Z7 277 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 V9GYQ6 96 aa20.38■□□□□ 0.85
ATG4D-201ENST00000309469 C10orf142B7Z368 130 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 H0YJX3 145 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 CLIC1O00299 241 aa20.37■□□□□ 0.85
ATG4D-201ENST00000309469 AK4P27144 223 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms