RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CAMK1GQ96NX5 476 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 PANX3Q96QZ0 392 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 RTKNQ9BST9 563 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 DPEP2Q9H4A9 486 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 PRDM13Q9H4Q3 707 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 COG4Q9H9E3 785 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 FBXO6Q9NRD1 293 aaPredicted RBP7.97□□□□□ -1.13
CHD6-201ENST00000309279 SNX15Q9NRS6 342 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 TMEM160Q9NX00 188 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 SRPK3Q9UPE1 567 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 DNAJC16Q9Y2G8 782 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 U3KQA8 63 aa7.97□□□□□ -1.13
CHD6-201ENST00000309279 C15orf38-AP3S2A0A0A6YYH1 394 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KIR2DS5A0A0G2JLQ3 304 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 A0A0G2JNG1 304 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 UBA6A0AVT1 1052 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 SLC5A10A0PJK1 596 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 IQCF5A8MTL0 148 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CXorf49A8MYA2 514 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 H3BML4 177 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KIR2DS3K7RE56 304 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 LIN7AO14910 233 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 HAT1O14929 419 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 TNFSF14O43557 240 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 GPC4O75487 556 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KLHL18O94889 574 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SLCO2B1O94956 709 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 GLAP06280 429 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 TUBBP07437 444 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 F7P08709 466 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 BRAFP15056 766 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CKMT2P17540 419 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 ACP1P24666 158 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 RPL10P27635 214 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 AOAHP28039 575 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 FMO4P31512 558 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CCR7P32248 378 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 STX2P32856 288 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 FASLGP48023 281 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CCR9P51686 369 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 EIF3BP55884 814 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 VSNL1P62760 191 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 ILF2Q12905 390 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 CHAF1BQ13112 559 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KIR2DS5Q14953 304 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 BCL2A1Q16548 175 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 TIGD6Q17RP2 521 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 MPEG1Q2M385 716 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SMU1Q2TAY7 513 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 PTRHD1Q6GMV3 140 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 TRMT10CQ7L0Y3 403 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 SFTPA2Q8IWL1 248 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 MCEMP1Q8IX19 187 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 FAM20CQ8IXL6 584 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SLC35F3Q8IY50 421 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SFRP1Q8N474 314 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 LILRA3Q8N6C8 439 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KCNJ9Q92806 393 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 TSSK1BQ9BXA7 367 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 OR52A5Q9H2C5 316 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 OSGEPL1Q9H4B0 414 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SLC32A1Q9H598 525 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 ACSS3Q9H6R3 686 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 KCNK13Q9HB14 408 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 EMC7Q9NPA0 242 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 PRDM8Q9NQV8 689 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 SLC17A6Q9P2U8 582 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 NDOR1Q9UHB4 597 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 RABGEF1Q9UJ41 708 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 RAB21Q9UL25 225 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 CORO1CQ9ULV4 474 aaPredicted RBP7.96□□□□□ -1.13
CHD6-201ENST00000309279 CDYLQ9Y232 598 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 PSAT1Q9Y617 370 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 WDFY3Q8IZQ1 3526 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 UNC13CQ8NB66 2214 aa7.96□□□□□ -1.13
CHD6-201ENST00000309279 TRAV20A0A0B4J274 112 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CASC3O15234 703 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 NUDT21O43809 227 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 H2AFYO75367 372 aaKnown RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 PIAS1O75925 651 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 LDOC1O95751 146 aaPredicted RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 SLC2A4P14672 509 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PNLIPP16233 465 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 GLB1P16278 677 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 XRCC1P18887 633 aaPredicted RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 MCM3P25205 808 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PHBP35232 272 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PITPNBP48739 271 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 DUSP3P51452 185 aaPredicted RBP7.96□□□□□ -1.14
CHD6-201ENST00000309279 CLCN7P51798 805 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PMS2P54278 862 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 RAC3P60763 192 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 PHEXP78562 749 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 TIAL1Q01085 375 aaKnown RBP eCLIP7.96□□□□□ -1.14
CHD6-201ENST00000309279 HSPA14Q0VDF9 509 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 NAB1Q13506 487 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CLCA4Q14CN2 919 aa7.96□□□□□ -1.14
CHD6-201ENST00000309279 CNN3Q15417 329 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms