RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 DUSP26Q9BV47 211 aa16■□□□□ 0.15
SSH3-201ENST00000308127 TTLL2Q9BWV7 592 aa16■□□□□ 0.15
SSH3-201ENST00000308127 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
SSH3-201ENST00000308127 EXOSC4Q9NPD3 245 aaKnown RBP16■□□□□ 0.15
SSH3-201ENST00000308127 PRAMEF25A6NGN4 478 aa16■□□□□ 0.15
SSH3-201ENST00000308127 TMEM229AB2RXF0 380 aa16■□□□□ 0.15
SSH3-201ENST00000308127 H3BM21 787 aa16■□□□□ 0.15
SSH3-201ENST00000308127 INPPL1O15357 1258 aa16■□□□□ 0.15
SSH3-201ENST00000308127 ADORA3P0DMS8 318 aa16■□□□□ 0.15
SSH3-201ENST00000308127 PAX3P23760 479 aa16■□□□□ 0.15
SSH3-201ENST00000308127 PBLDP30039 288 aaPredicted RBP16■□□□□ 0.15
SSH3-201ENST00000308127 GRK3P35626 688 aa16■□□□□ 0.15
SSH3-201ENST00000308127 NSG1P42857 185 aa16■□□□□ 0.15
SSH3-201ENST00000308127 COPZ1P61923 177 aa16■□□□□ 0.15
SSH3-201ENST00000308127 CCSAPQ6IQ19 270 aaPredicted RBP16■□□□□ 0.15
SSH3-201ENST00000308127 GATAD2AQ86YP4 633 aa16■□□□□ 0.15
SSH3-201ENST00000308127 CYP4Z2PQ8N1L4 340 aa16■□□□□ 0.15
SSH3-201ENST00000308127 OR10G2Q8NGC3 310 aa16■□□□□ 0.15
SSH3-201ENST00000308127 UBTD2Q8WUN7 234 aa16■□□□□ 0.15
SSH3-201ENST00000308127 ALG14Q96F25 216 aa16■□□□□ 0.15
SSH3-201ENST00000308127 TCF25Q9BQ70 676 aa16■□□□□ 0.15
SSH3-201ENST00000308127 TMEM161AQ9NX61 479 aa16■□□□□ 0.15
SSH3-201ENST00000308127 ASIC5Q9NY37 505 aa16■□□□□ 0.15
SSH3-201ENST00000308127 DOCK6Q96HP0 2047 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 SEMG1P04279 462 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 CXCR4P61073 352 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 CYP4F8P98187 520 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PTSQ03393 145 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PPIGQ13427 754 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■□□ 16.8
SSH3-201ENST00000308127 NAE1Q13564 534 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 INO80DQ53TQ3 878 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 FAHD1Q6P587 224 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 GDPD3Q7L5L3 318 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 SLC44A2Q8IWA5 706 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 DMRTB1Q96MA1 342 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 CCM2Q9BSQ5 444 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 DNAJC11Q9NVH1 559 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 NDUFAF4Q9P032 175 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PSORS1C1Q9UIG5 152 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 BOLA1Q9Y3E2 137 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 MAP4K5Q9Y4K4 846 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 LYVE1Q9Y5Y7 322 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 TRBV5-4A0A0C4DH59 114 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PCDH17O14917 1159 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 IGFBP1P08833 259 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 GPX2P18283 190 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PRPS1L1P21108 318 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 CA8P35219 290 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 PFN3P60673 137 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 MEF2AQ02078 507 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 SMARCB1Q12824 385 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 GPR162Q16538 588 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 DNAJC22Q8N4W6 341 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 VANGL1Q8TAA9 524 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 CIDECQ96AQ7 238 aaPredicted RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 IL4I1Q96RQ9 567 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
SSH3-201ENST00000308127 VN1R3Q9BXE9 311 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 ZNF226Q9NYT6 803 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 VPS29Q9UBQ0 182 aa15.99■□□□□ 0.15
SSH3-201ENST00000308127 ZNF821O75541 412 aaPredicted RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 ANXA4P09525 319 aaPredicted RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 CKMT1AP12532 417 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 BDKRB1P46663 353 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 LMAN2Q12907 356 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 DOC2AQ14183 400 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 LEXMQ3ZCV2 418 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 ZNF385BQ569K4 471 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 UBE2UQ5VVX9 321 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 OTOP2Q7RTS6 562 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 BCDIN3DQ7Z5W3 292 aaKnown RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 LGI4Q8N135 537 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 ADAMTS19Q8TE59 1207 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 HRASLS5Q96KN8 279 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 TP63Q9H3D4 680 aaPredicted RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 CCNB1IP1Q9NPC3 277 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 DUSP12Q9UNI6 340 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 CLDN24A6NM45 220 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 RGS5O15539 181 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 S100A5P33763 92 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 BMPR1AP36894 532 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 AP1S1P61966 158 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 TSTQ16762 297 aaKnown RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 RSBN1Q5VWQ0 802 aaPredicted RBP15.98■□□□□ 0.15
SSH3-201ENST00000308127 MMP21Q8N119 569 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 OR4A15Q8NGL6 344 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 NFKBIDQ8NI38 313 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 ASB11Q8WXH4 323 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 SCLYQ96I15 445 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 CEP295NLQ96MC4 621 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 SIGLEC11Q96RL6 698 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 TPK1Q9H3S4 243 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 CWH43Q9H720 699 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 RDH14Q9HBH5 336 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 IMPAD1Q9NX62 359 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 ZDHHC3Q9NYG2 299 aa15.98■□□□□ 0.15
SSH3-201ENST00000308127 PNMA8CA0A1B0GUJ8 204 aa15.97■□□□□ 0.15
SSH3-201ENST00000308127 RFXAPO00287 272 aa15.97■□□□□ 0.15
SSH3-201ENST00000308127 NRG2O14511 850 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms