RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SEMG2Q02383 582 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 RUNX3Q13761 415 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 GRIN2CQ14957 1233 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ITPRIPL2Q3MIP1 535 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 NXNL2Q5VZ03 156 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 USP45Q70EL2 814 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SYVN1Q86TM6 617 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 GLB1L3Q8NCI6 653 aaPredicted RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 MYLIPQ8WY64 445 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 IMP4Q96G21 291 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 ASB16Q96NS5 453 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 TM9SF3Q9HD45 589 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 NPAP1Q9NZP6 1156 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 FAM8A1Q9UBU6 413 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 CFL2Q9Y281 166 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SAMHD1Q9Y3Z3 626 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 CD3EAPO15446 510 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 OLFM2O95897 454 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 HLA-FP30511 346 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 KRT20P35900 424 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 PRIM2P49643 509 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 DNAJB13P59910 316 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 RBM20Q5T481 1227 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 C22orf39Q6P5X5 142 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ZNF605Q86T29 641 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 TP53I13Q8NBR0 393 aaPredicted RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 FCGR1BQ92637 280 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 REXO5Q96IC2 774 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ALOXE3Q9BYJ1 711 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 ABCB9Q9NP78 766 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ZDHHC4Q9NPG8 344 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 PDP1Q9P0J1 537 aaPredicted RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SESN1Q9Y6P5 492 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SSX4O60224 188 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 HTR1EP28566 365 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 CA5AP35218 305 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 EPHA5P54756 1037 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SEC13P55735 322 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 RAB25P57735 213 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 TP53BP2Q13625 1128 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 SMN1Q16637 294 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 SGO1Q5FBB7 561 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 LRRC73Q5JTD7 316 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 PAGE3Q5JUK9 113 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 CXorf57Q6NSI4 855 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 TXNDC11Q6PKC3 985 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ADGRG2Q8IZP9 1017 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 OR4K2Q8NGD2 314 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 OR8D1Q8WZ84 308 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 TP53INP1Q96A56 240 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 HBEGFQ99075 208 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 FAM83DQ9H4H8 585 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ELOVL2Q9NXB9 296 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 CLEC4EQ9ULY5 219 aa10.55□□□□□ -0.72
LSM3-201ENST00000306024 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
LSM3-201ENST00000306024 METTL15A6NJ78 407 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SMAD6O43541 496 aaKnown RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 GOT2P00505 430 aaKnown RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 CYP17A1P05093 508 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 LPOP22079 712 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 NUDT6P53370 316 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 MXD1Q05195 221 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SLAMF1Q13291 335 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ZNF77Q15935 545 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 C2orf27AQ580R0 203 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CARD16Q5EG05 197 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SIRPB2Q5JXA9 342 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ZNF57Q68EA5 555 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 ANKRD34AQ69YU3 496 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 LARP4Q71RC2 724 aaKnown RBP eCLIP10.54□□□□□ -0.722e-7■□□□□ 11.1
LSM3-201ENST00000306024 TRIM69Q86WT6 500 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 TIGD4Q8IY51 512 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SLC22A15Q8IZD6 547 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CDC26Q8NHZ8 85 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 DIRAS2Q96HU8 199 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 FERD3LQ96RJ6 166 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 POLG2Q9UHN1 485 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ZNF222Q9UK12 451 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SPATA2Q9UM82 520 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 DUSP12Q9UNI6 340 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ING4Q9UNL4 249 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 FAM50BQ9Y247 325 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 VWA7Q9Y334 891 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 PCDHB14Q9Y5E9 798 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ELOVL7A1L3X0 281 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CTDSP2O14595 271 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 SNX4O95219 450 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 PDGFAP04085 211 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 BMP1P13497 986 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 HLA-EP13747 358 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
LSM3-201ENST00000306024 ZXDBP98169 803 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 DUSP7Q16829 419 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 MZT2BQ6NZ67 158 aa10.54□□□□□ -0.72
LSM3-201ENST00000306024 BLOC1S3Q6QNY0 202 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms