RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ARVCFO00192 962 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 RCBTB2O95199 551 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SPATA31D3P0C874 917 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 GSTT2P0CG29 244 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 RYKP34925 604 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 OR4D2P58180 307 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 TSPAN5P62079 268 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 KCNC4Q03721 635 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ST3GAL3Q11203 375 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 PTCHD3Q3KNS1 767 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CARD16Q5EG05 197 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SPATA31D4Q6ZUB0 917 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 GALNT13Q8IUC8 556 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF548Q8NEK5 533 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 RGMAQ96B86 450 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 LHPPQ9H008 270 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 MKKSQ9NPJ1 570 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 PRMT3O60678 531 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SOX14O95416 240 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CSNK2A2P19784 350 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 TAS2R43P59537 309 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 TCEANCQ8N8B7 351 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ARL14EPQ8N8R7 260 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ABHD11Q8NFV4 315 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ACOT12Q8WYK0 555 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 MOCOSQ96EN8 888 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SUSD3Q96L08 255 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 TSSK6Q9BXA6 273 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 RANBP3Q9H6Z4 567 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF639Q9UID6 485 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 FXYD6-FXYD2A0A087WZ82 144 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 A0A1W2PRQ8 180 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 BTBD19C9JJ37 291 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 KDELR3O43731 214 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 PCCBP05166 539 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 SLC9A3P48764 834 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 RPA4Q13156 261 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 VMACQ2NL98 169 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 MS4A13Q5J8X5 152 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 PRAMEF17Q5VTA0 474 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 PNCKQ6P2M8 343 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 ZSWIM9Q86XI8 627 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 RAB11FIP5Q9BXF6 653 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 FXYD6Q9H0Q3 95 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 PAQR5Q9NXK6 330 aaPredicted RBP12.46□□□□□ -0.42
COL3A1-201ENST00000304636 DEC1Q9P2X7 70 aa12.46□□□□□ -0.42
COL3A1-201ENST00000304636 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 M0R233 179 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CXCL14O95715 111 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 APOC1P02654 83 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 GGT1P19440 569 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 NOL9Q5SY16 702 aaKnown RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 KANK2Q63ZY3 851 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 SDR16C5Q8N3Y7 309 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 OR6K6Q8NGW6 343 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 C5orf34Q96MH7 638 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 SLC2A13Q96QE2 648 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 SYT11Q9BT88 431 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MYH10P35580 1976 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CDK4P11802 303 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MAP2K3P46734 347 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 C10orf62Q5T681 223 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 GHDCQ8N2G8 530 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 FAM129BQ96TA1 746 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 DOHHQ9BU89 302 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 SELPP16109 830 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 LAG3P18627 525 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CD40LGP29965 261 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 FKBP1BP68106 108 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 NPRL3Q12980 569 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 KCNC3Q14003 757 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 PTGR1Q14914 329 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 REEP3Q6NUK4 255 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 KIAA1324Q6UXG2 1013 aaKnown RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CHERPQ8IWX8 916 aaKnown RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 ZC3H10Q96K80 434 aaKnown RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MRGPRX2Q96LB1 330 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MED31Q9Y3C7 131 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
COL3A1-201ENST00000304636 KIAA0513O60268 411 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 APOL3O95236 402 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 MATN4O95460 622 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 S1PR4O95977 384 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 EDNRAP25101 427 aa12.45□□□□□ -0.42
COL3A1-201ENST00000304636 GNALP38405 381 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms