RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR4F6Q8NGB9 312 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 PPP1R14CQ8TAE6 165 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 CLIP3Q96DZ5 547 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 MAGEB10Q96LZ2 347 aaPredicted RBP23.36■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF382Q96SR6 550 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 ENAMQ9NRM1 1142 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 SRPK3Q9UPE1 567 aa23.36■■□□□ 1.33
HOXC9-201ENST00000303450 HYKKA2RU49 373 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 ANKDD1BA6NHY2 528 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 P2RX6O15547 441 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 CPNE3O75131 537 aaKnown RBP23.35■■□□□ 1.33
HOXC9-201ENST00000303450 HBQ1P09105 142 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 NEFHP12036 1026 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 CD82P27701 267 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 GSTM2P28161 218 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 ARSFP54793 590 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 PRTGQ2VWP7 1150 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 FAM214AQ32MH5 1076 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 HSP90B2PQ58FF3 399 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 GPRIN3Q6ZVF9 776 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 GATA6Q92908 595 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 TM4SF19Q96DZ7 209 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 CNDP1Q96KN2 507 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 MACROD1Q9BQ69 325 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 RUVBL1Q9Y265 456 aaKnown RBP23.35■■□□□ 1.33
HOXC9-201ENST00000303450 PCDHGA11Q9Y5H2 935 aa23.35■■□□□ 1.33
HOXC9-201ENST00000303450 A0A1B0GTL3 188 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 PCNAP12004 261 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 PKNOX1P55347 436 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 PWP1Q13610 501 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 YOD1Q5VVQ6 348 aaPredicted RBP23.34■■□□□ 1.33
HOXC9-201ENST00000303450 ZCCHC23Q6ZST2 131 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 LAS2Q8IYD9 372 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 OR7G3Q8NG95 312 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 MDM1Q8TC05 714 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 CCT6BQ92526 530 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 REPS1Q96D71 796 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 SEC16BQ96JE7 1060 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 MID1IP1Q9NPA3 183 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 CUTCQ9NTM9 273 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 TXLNGQ9NUQ3 528 aa23.34■■□□□ 1.33
HOXC9-201ENST00000303450 TMEM184BQ9Y519 407 aaPredicted RBP23.34■■□□□ 1.33
HOXC9-201ENST00000303450 H0YIV9 168 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 STMND1H3BQB6 276 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 WDR4P57081 412 aaKnown RBP23.33■■□□□ 1.33
HOXC9-201ENST00000303450 RGS1Q08116 209 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 COL9A2Q14055 689 aaPredicted RBP23.33■■□□□ 1.33
HOXC9-201ENST00000303450 ZRSR2Q15696 482 aaKnown RBP23.33■■□□□ 1.33
HOXC9-201ENST00000303450 GGTA1PQ4G0N0 100 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 MANEAQ5SRI9 462 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 TTC19Q6DKK2 380 aaPredicted RBP23.33■■□□□ 1.33
HOXC9-201ENST00000303450 LETMD1Q6P1Q0 360 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 SYVN1Q86TM6 617 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 ZFAND4Q86XD8 727 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 TRMOQ9BU70 441 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 RHBGQ9H310 441 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 CCDC86Q9H6F5 360 aaKnown RBP23.33■■□□□ 1.33
HOXC9-201ENST00000303450 TRPS1Q9UHF7 1281 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 ZNF225Q9UK10 706 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 SDK2Q58EX2 2172 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 SEC16AO15027 2179 aa23.33■■□□□ 1.33
HOXC9-201ENST00000303450 NPHS1O60500 1241 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 OR4F21O95013 312 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 ALAS2P22557 587 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 CCR10P46092 362 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 EMP3P54852 163 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 MUM1Q2TAK8 710 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 GARNL3Q5VVW2 1013 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 RHBDD2Q6NTF9 364 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 TTLL10Q6ZVT0 673 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 SLC38A9Q8NBW4 561 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 GALNT6Q8NCL4 622 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 CREB3L4Q8TEY5 395 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 AGAP11Q8TF27 550 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 DHCR7Q9UBM7 475 aaKnown RBP23.33■■□□□ 1.32
HOXC9-201ENST00000303450 ACSL6Q9UKU0 697 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 AHCTF1Q8WYP5 2266 aa23.33■■□□□ 1.32
HOXC9-201ENST00000303450 UBFD1O14562 309 aaKnown RBP23.32■■□□□ 1.32
HOXC9-201ENST00000303450 FFAR3O14843 346 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 GPR42O15529 346 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 CLEC3AO75596 197 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 ESRRBO95718 433 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 SERPINA6P08185 405 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 SERPINB1P30740 379 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 GPS2Q13227 327 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 DDX39BQ13838 428 aaKnown RBP23.32■■□□□ 1.32
HOXC9-201ENST00000303450 CHI3L2Q15782 390 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 NDUFA9Q16795 377 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 ADNP2Q6IQ32 1131 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 C6orf15Q6UXA7 325 aaPredicted RBP23.32■■□□□ 1.32
HOXC9-201ENST00000303450 CDYL2Q8N8U2 506 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 KCT2Q8NC54 265 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 NT5CQ8TCD5 201 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 FGF11Q92914 225 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 SPRY4Q9C004 299 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 NDOR1Q9UHB4 597 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 ADGRE2Q9UHX3 823 aa23.32■■□□□ 1.32
HOXC9-201ENST00000303450 H3BQF6 201 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 DLGAP3O95886 979 aa23.31■■□□□ 1.32
HOXC9-201ENST00000303450 KLK3P07288 261 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms