RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SUN5Q8TC36 379 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 RELTQ969Z4 430 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 BEX2Q9BXY8 128 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 ZNF385DQ9H6B1 395 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 PAK1IP1Q9NWT1 392 aaPredicted RBP13.58□□□□□ -0.23
SDC2-201ENST00000302190 GPR83Q9NYM4 423 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 DNAJC27Q9NZQ0 273 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 SEC14L3Q9UDX4 400 aa13.58□□□□□ -0.23
SDC2-201ENST00000302190 KRBA1A5PL33 1030 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 GLOD5A6NK44 160 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 OR7A17O14581 309 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 EIF2S1P05198 315 aaKnown RBP13.58□□□□□ -0.24
SDC2-201ENST00000302190 CYP2A6P11509 494 aaPredicted RBP13.58□□□□□ -0.24
SDC2-201ENST00000302190 MYL12AP19105 171 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 MAGEA11P43364 429 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 LMAN2Q12907 356 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 CLCA4Q14CN2 919 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 VMACQ2NL98 169 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 GPAT3Q53EU6 434 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.249e-7■■■□□ 17.9
SDC2-201ENST00000302190 THOC6Q86W42 341 aaKnown RBP13.58□□□□□ -0.24
SDC2-201ENST00000302190 COQ7Q99807 217 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 TEKT2Q9UIF3 430 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 POU2F3Q9UKI9 436 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 RUVBL1Q9Y265 456 aaKnown RBP13.58□□□□□ -0.24
SDC2-201ENST00000302190 COL6A3P12111 3177 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 TBC1D3BA6NDS4 549 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 A6NL46 340 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 AQP9O43315 295 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 CHST9Q7L1S5 443 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 CHST14Q8NCH0 376 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 TSPEARQ8WU66 669 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 ATL1Q8WXF7 558 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 RHBDF1Q96CC6 855 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 IL17FQ96PD4 163 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 IMP3Q9NV31 184 aaKnown RBP13.58□□□□□ -0.24
SDC2-201ENST00000302190 AP3M1Q9Y2T2 418 aa13.58□□□□□ -0.24
SDC2-201ENST00000302190 SLC35F4A4IF30 521 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TSPAN6O43657 245 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 FPR1P21462 350 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PPP2R1BP30154 601 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TAS2R50P59544 299 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 GPNMBQ14956 572 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 PLEKHG6Q3KR16 790 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 GCNT6Q5T4J0 391 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 KIAA1614Q5VZ46 1190 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 CAPN13Q6MZZ7 669 aaPredicted RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 NLGN4XQ8N0W4 816 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 WFDC5Q8TCV5 224 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 BARD1Q99728 777 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 HDHD2Q9H0R4 259 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TMEM9Q9P0T7 183 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 SLC22A1O15245 554 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ARHGEF9O43307 516 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 IDH3BO43837 385 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 CSF2P04141 144 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 C8AP07357 584 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PYDC2Q56P42 97 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TPRG1LQ5T0D9 272 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 MEX3DQ86XN8 651 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 TICAM1Q8IUC6 712 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 C19orf18Q8NEA5 215 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 YTHDF1Q9BYJ9 559 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PCDHGB3Q9Y5G1 929 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PMF1-BGLAPU3KQ54 211 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PIPSLA2A3N6 862 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 TNFRSF21O75509 655 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 PEX11BO96011 259 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ALOX5P09917 674 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 SDC1P18827 310 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ACRV1P26436 265 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 LYPLAL1Q5VWZ2 237 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 MED27Q6P2C8 311 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 NCEH1Q6PIU2 408 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 FAM131AQ6UXB0 335 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 RNF130Q86XS8 419 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 DTX3Q8N9I9 347 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 GFM1Q96RP9 751 aaKnown RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 ZBTB20Q9HC78 741 aaPredicted RBP13.57□□□□□ -0.24
SDC2-201ENST00000302190 RAD18Q9NS91 495 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 SEMA3GQ9NS98 782 aa13.57□□□□□ -0.24
SDC2-201ENST00000302190 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms