RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CDH1P12830 882 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 PTPN6P29350 595 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 MTHFRP42898 656 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 TBPL1P62380 186 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 ZNF621Q6ZSS3 439 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 PAPD5Q8NDF8 572 aaKnown RBP21.14■□□□□ 0.97
TPM4-201ENST00000300933 OR7G3Q8NG95 312 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 TMBIM1Q969X1 311 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 ZNF347Q96SE7 839 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 LGR4Q9BXB1 951 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 KLHL25Q9H0H3 589 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 GPN2Q9H9Y4 310 aaPredicted RBP21.14■□□□□ 0.97
TPM4-201ENST00000300933 ASIC5Q9NY37 505 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 U3KQV3 271 aa21.14■□□□□ 0.97
TPM4-201ENST00000300933 TRBV5-3A0A0A0MS03 114 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 MAN1A2O60476 641 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 BCAS1O75363 584 aaPredicted RBP21.13■□□□□ 0.97
TPM4-201ENST00000300933 RB1P06400 928 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 UMPSP11172 480 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 LAMP1P11279 417 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 PRPS2P11908 318 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 P2RY2P41231 377 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 CHRNB3Q05901 458 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 HKDC1Q2TB90 917 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 NLRP8Q86W28 1048 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 SCAIQ8N9R8 606 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 ZNF740Q8NDX6 193 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 SUSD6Q92537 303 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 DPH2Q9BQC3 489 aaPredicted RBP21.13■□□□□ 0.97
TPM4-201ENST00000300933 TMEM245Q9H330 911 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 COX7A2P14406 83 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 RPS13P62277 151 aaKnown RBP21.13■□□□□ 0.97
TPM4-201ENST00000300933 OCA2Q04671 838 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 ACSM2AQ08AH3 577 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 SMU1Q2TAY7 513 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 LIPJQ5W064 366 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 ACSM2BQ68CK6 577 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 GTF2IRD2BQ6EKJ0 949 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 VITQ6UXI7 678 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 RNF165Q6ZSG1 346 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 GTF2IRD2Q86UP8 949 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 STK32CQ86UX6 486 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 CNDP2Q96KP4 475 aaKnown RBP21.13■□□□□ 0.97
TPM4-201ENST00000300933 PANX1Q96RD7 426 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 KXD1Q9BQD3 176 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 RPP25Q9BUL9 199 aaKnown RBP21.13■□□□□ 0.97
TPM4-201ENST00000300933 SPNS1Q9H2V7 528 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 RAD18Q9NS91 495 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 VPS4AQ9UN37 437 aa21.13■□□□□ 0.97
TPM4-201ENST00000300933 A8MU76 341 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 UPK1AO00322 258 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 LINC01565O15544 149 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 ABCB7O75027 752 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PCCBP05166 539 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 KIR3DL1P43629 444 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SOX9P48436 509 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SHHQ15465 462 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 FAM98BQ52LJ0 330 aaKnown RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 SPARTQ8N0X7 666 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 GOLM1Q8NBJ4 401 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 ITCHQ96J02 903 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 CPPED1Q9BRF8 314 aaPredicted RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 YTHDF1Q9BYJ9 559 aaKnown RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 KCNH6Q9H252 994 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SMURF2Q9HAU4 748 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SPATA7Q9P0W8 599 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SLC23A2Q9UGH3 650 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 ITGB1BP2Q9UKP3 347 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PCM1Q15154 2024 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 EPOPA6NHQ4 379 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 NOBOXO60393 691 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SERPINA1P01009 418 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PRKACGP22612 351 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 OPRD1P41143 372 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 TPD52P55327 224 aaPredicted RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 IFITM3Q01628 133 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 MICU2Q8IYU8 434 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 NRSN1Q8IZ57 195 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SH3KBP1Q96B97 665 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 MROQ9BYG7 248 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PBX4Q9BYU1 374 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PRSS16Q9NQE7 514 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 NFKBIL1Q9UBC1 381 aaPredicted RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 IGLON5A6NGN9 336 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 SCAMP1O15126 338 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 CREG1O75629 220 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 TGFB1P01137 390 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 NPPBP16860 134 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 ZNF846Q147U1 533 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 PON2Q15165 354 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 C6orf183Q5T699 404 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 FAM180BQ6P0A1 224 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 ERN2Q76MJ5 926 aaKnown RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 TMIEQ8NEW7 156 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 POLE4Q9NR33 117 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 THG1LQ9NWX6 298 aaKnown RBP21.12■□□□□ 0.97
TPM4-201ENST00000300933 DPP7Q9UHL4 492 aa21.12■□□□□ 0.97
TPM4-201ENST00000300933 FPGTO14772 594 aa21.11■□□□□ 0.97
TPM4-201ENST00000300933 RAP2AP10114 183 aa21.11■□□□□ 0.97
TPM4-201ENST00000300933 JUNBP17275 347 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms