RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR4K17Q8NGC6 315 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR4K1Q8NGD4 311 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ITPAQ9BY32 194 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 M0R036 132 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TBX10O75333 385 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 POLR2CP19387 275 aaPredicted RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 AP1S2P56377 157 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC25A11Q02978 314 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RFTN1Q14699 578 aaPredicted RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 IGDCC3Q8IVU1 814 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR51I1Q9H343 314 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NUP50Q9UKX7 468 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PTGDR2Q9Y5Y4 395 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 INPPL1O15357 1258 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MSX1P28360 303 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TLE2Q04725 743 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 THOC7Q6I9Y2 204 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PYURFQ96I23 114 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PEBP4Q96S96 227 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ITM2CQ9NQX7 267 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 M0QX08 132 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GRPRP30550 384 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC18A2Q05940 514 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PCDHGB7Q9Y5F8 929 aa13.17□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CHRNA1P02708 482 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CSTBP04080 98 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RLN2P04090 185 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 AGXTP21549 392 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ARPC4P59998 168 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CDK6Q00534 326 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NNATQ16517 81 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PNLDC1Q8NA58 520 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ASB9Q96DX5 294 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMEM109Q9BVC6 243 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 AASSQ9UDR5 926 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MUSKO15146 869 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ADH7P40394 386 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 CASRP41180 1078 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TPRG1LQ5T0D9 272 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TTLL10Q6ZVT0 673 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMCO6Q96DC7 493 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C17orf62Q9BQA9 187 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 AIFM2Q9BRQ8 373 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FBRSL1Q9HCM7 1045 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TACSTD2P09758 323 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LASP1Q14847 261 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PTCHD3Q3KNS1 767 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 C1orf189Q5VU69 101 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR2T5Q6IEZ7 315 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 LRRC70Q7Z2Q7 622 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 TMEM156Q8N614 296 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 OR2T29Q8NH02 315 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SUN3Q8TAQ9 357 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 DKKL1Q9UK85 242 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SRCP12931 536 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 EDNRBP24530 442 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GSK3BP49841 420 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 PLD6Q8N2A8 252 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 KRTCAP2Q8N6L1 136 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MEAF6Q9HAF1 191 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 MED11Q9P086 117 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RNF13O43567 381 aa13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-201ENST00000299847 ATXN7L3Q14CW9 347 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms