RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 YME1L1Q96TA2 773 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 NEURL2Q9BR09 285 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 YIPF4Q9BSR8 244 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 TRIT1Q9H3H1 467 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 SLC52A3Q9NQ40 469 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ASF1AQ9Y294 204 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 PSME4Q14997 1843 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 FAM220BPB1ANY3 271 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 RTCAO00442 366 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 HOXA2O43364 376 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ERAL1O75616 437 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 RPLP0P05388 317 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ALPPL2P10696 532 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ZFP36L2P47974 494 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 CBX2Q14781 532 aaPredicted RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 MAD2L1BPQ15013 274 aaPredicted RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 MEX3DQ86XN8 651 aaKnown RBP16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 KBTBD8Q8NFY9 601 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ZNF675Q8TD23 568 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 GANCQ8TET4 914 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 CMTM7Q96FZ5 175 aa16.78■□□□□ 0.28
CHRNA5-201ENST00000299565 ALOX5P09917 674 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 GSTT2P0CG29 244 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 GSTT2BP0CG30 244 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 ITIH1P19827 911 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 POLR2LP62875 67 aaKnown RBP16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 EXOC3L2Q2M3D2 409 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 ARSIQ5FYB1 569 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 AQP11Q8NBQ7 271 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 TIGARQ9NQ88 270 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 MBD1Q9UIS9 605 aaPredicted RBP16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 SIP14410 1827 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 TAS2R50P59544 299 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 GRSF1Q12849 480 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 SCARB2Q14108 478 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 LYPLAL1Q5VWZ2 237 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 ERICH5Q6P6B1 374 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 PLEKHG7Q6ZR37 379 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 P2RY12Q9H244 342 aa16.77■□□□□ 0.28
CHRNA5-201ENST00000299565 TMCC2O75069 709 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 CSF2P04141 144 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 ELFN1P0C7U0 828 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 RCVRNP35243 200 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 LIPAP38571 399 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 MANFP55145 182 aaKnown RBP16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 IFI44LQ53G44 452 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 RAET1GQ6H3X3 334 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 NPAS3Q8IXF0 933 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 FAM83FQ8NEG4 500 aaPredicted RBP16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 MTERF3Q96E29 417 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 ALOXE3Q9BYJ1 711 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 CLN6Q9NWW5 311 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 RIMKLBQ9ULI2 386 aa16.77■□□□□ 0.27
CHRNA5-201ENST00000299565 ANKRD28O15084 1053 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 TSC22D2O75157 780 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 AP2A2O94973 939 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 CAPNS1P04632 268 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 PPIGQ13427 754 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 GCNT6Q5T4J0 391 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 CHST9Q7L1S5 443 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 KLHDC8BQ8IXV7 354 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 CIDECQ96AQ7 238 aaPredicted RBP16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 IL17FQ96PD4 163 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC29A3Q9BZD2 475 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 KLHL3Q9UH77 587 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 A0A1W2PQ45 241 aaPredicted RBP16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 A0A1W2PQY0 241 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 MYL12BO14950 172 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 ADAMDEC1O15204 470 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 C8GP07360 202 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 MVKQ03426 396 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 SLC38A4Q969I6 547 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 ART5Q96L15 291 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 SORBS1Q9BX66 1292 aaKnown RBP16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 NLNQ9BYT8 704 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 RLIMQ9NVW2 624 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 TVP23BQ9NYZ1 205 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 IDH3BO43837 385 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 MAPK8P45983 427 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 PTPN5P54829 565 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 INAVAQ3KP66 663 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 TCAIMQ8N3R3 496 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 C1GALT1C1Q96EU7 318 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 TMEFF2Q9UIK5 374 aaPredicted RBP16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 ITM2BQ9Y287 266 aa16.76■□□□□ 0.27
CHRNA5-201ENST00000299565 TMEM202A6NGA9 273 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 GABRR3A8MPY1 467 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 HOXD10P28358 340 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 CTF1Q16619 201 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 TRIM40Q6P9F5 258 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 CCBE1Q6UXH8 406 aaPredicted RBP16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 HUS1BQ8NHY5 278 aa16.75■□□□□ 0.27
CHRNA5-201ENST00000299565 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms