RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CCR8P51685 355 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 SRSF11Q05519 484 aaKnown RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 MTAPQ13126 283 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 SELPLGQ14242 412 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 GALNT18Q6P9A2 607 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 FIP1L1Q6UN15 594 aaKnown RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 PTRH1Q86Y79 214 aaKnown RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 OR52E1Q8NGJ3 308 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 CDC26Q8NHZ8 85 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 KCNH6Q9H252 994 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 XKR8Q9H6D3 395 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 SIRT5Q9NXA8 310 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TBC1D29Q9UFV1 150 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 SNX13Q9Y5W8 968 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 PRAMEF26H0Y7S4 382 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 CASQ2O14958 399 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 PCDH7O60245 1069 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 ERN1O75460 977 aaKnown RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 IL9P15248 144 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 HTR1EP28566 365 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 GRIA3P42263 894 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 WASH2PQ6VEQ5 465 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 TSTD1Q8NFU3 115 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 DUS3LQ96G46 650 aaKnown RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 SERHLQ9NQF3 203 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 ADGRE2Q9UHX3 823 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 MAPRE3Q9UPY8 281 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 ICKQ9UPZ9 632 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 A0A096LPI6 279 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 GNG14A0A1W2PPG7 69 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 AQP12BA6NM10 295 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 KDM1AO60341 852 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 COX7A2P14406 83 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 FOSL2P15408 326 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 REEP5Q00765 189 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 SIM2Q14190 667 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 TRIP10Q15642 601 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 UGT8Q16880 541 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 ABRAXAS1Q6UWZ7 409 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 Q6ZSR6 202 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 COMMD6Q7Z4G1 85 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 AQP12AQ8IXF9 295 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 MSRB3Q8IXL7 192 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 OR7A2PQ8NGA2 310 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 C2orf42Q9NWW7 574 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 SLC25A37Q9NYZ2 338 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 MRPS17Q9Y2R5 130 aaKnown RBP13.69□□□□□ -0.22
C9orf3-202ENST00000297979 COLEC10Q9Y6Z7 277 aa13.69□□□□□ -0.22
C9orf3-202ENST00000297979 SCAMP2O15127 329 aaKnown RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 RASGRP1O95267 797 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 OXTRP30559 389 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 RABIFP47224 123 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 MYBPC3Q14896 1274 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ALG11Q2TAA5 492 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 OR4F3Q6IEY1 312 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ABI3BPQ7Z7G0 1075 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PHACTR4Q8IZ21 702 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 OR4K1Q8NGD4 311 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PITHD1Q9GZP4 211 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 RHBGQ9H310 441 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 KIR3DX1Q9H7L2 352 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 COPS7BQ9H9Q2 264 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PNMA8BQ9ULN7 279 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 DMTF1Q9Y222 760 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 AP4S1Q9Y587 144 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PCDHB11Q9Y5F2 797 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PTX3P26022 381 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 PEX2P28328 305 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 SERPINB1P30740 379 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 SLC7A1P30825 629 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 CYP4F3Q08477 520 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ZNF763Q0D2J5 394 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 TCEA2Q15560 299 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 HKDC1Q2TB90 917 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 AASDHQ4L235 1098 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 RUNDC3AQ59EK9 446 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 LPCAT4Q643R3 524 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ANKRD46Q86W74 232 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 TMEM126BQ8IUX1 230 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 METTL4Q8N3J2 472 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 TMEM132CQ8N3T6 1108 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 SMYD1Q8NB12 490 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 OR8J2Q8NGG1 315 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-202ENST00000297979 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 NT5DC2Q9H857 520 aa13.68□□□□□ -0.22
C9orf3-202ENST00000297979 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms