RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZDHHC3Q9NYG2 299 aa18.51■□□□□ 0.55
TRA2A-201ENST00000297071 NUP214P35658 2090 aaPredicted RBP18.51■□□□□ 0.55
TRA2A-201ENST00000297071 PDZK1P1A8MUH7 402 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 STC2O76061 302 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 SLITRK5O94991 958 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 VIPP01282 170 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 ENDOUP21128 410 aaKnown RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 CA5AP35218 305 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 NR4A2P43354 598 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 SLC15A1P46059 708 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 HMGA2P52926 109 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 CRYBA2P53672 197 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 COPZ1P61923 177 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 PTPRRQ15256 657 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 MICAQ29983 383 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 HECTD3Q5T447 861 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 GPR153Q6NV75 609 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 TSEN54Q7Z6J9 526 aaKnown RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 RASAL3Q86YV0 1011 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 RASGRP3Q8IV61 690 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 KLHDC8AQ8IYD2 350 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 C11orf65Q8NCR3 313 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 CXorf40BQ96DE9 158 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 C11orf24Q96F05 449 aaPredicted RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 EGLN2Q96KS0 407 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 SEPT5Q99719 369 aaPredicted RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 MYOCQ99972 504 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 TTPALQ9BTX7 342 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 TAPBPLQ9BX59 468 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 CRISPLD1Q9H336 500 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 RUBCNLQ9H714 662 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 DYRK4Q9NR20 520 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 ASAH2Q9NR71 780 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 ZNF282Q9UDV7 671 aaPredicted RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 TSR3Q9UJK0 312 aaKnown RBP18.5■□□□□ 0.55
TRA2A-201ENST00000297071 OR51B4Q9Y5P0 310 aa18.5■□□□□ 0.55
TRA2A-201ENST00000297071 IGLV3-16A0A075B6K0 115 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CCRL2O00421 344 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 PTHP01270 115 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 KLKB1P03952 638 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 STSP08842 583 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 COX7A2P14406 83 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 BPIP17213 487 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CHMP24386 653 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CORO1AP31146 461 aaKnown RBP18.49■□□□□ 0.55
TRA2A-201ENST00000297071 SGSHP51688 502 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 GPR50Q13585 617 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 UBE2R2Q712K3 238 aaPredicted RBP18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CLDN19Q8N6F1 224 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 VPS37AQ8NEZ2 397 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 SPATA6Q9NWH7 488 aaPredicted RBP18.49■□□□□ 0.55
TRA2A-201ENST00000297071 NDUFAF4Q9P032 175 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 FZD4Q9ULV1 537 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 N6AMT1Q9Y5N5 214 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 ANKRD34BA5PLL1 514 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 B3GALT4O96024 378 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 HIST1H2AGP0C0S8 130 aaPredicted RBP18.49■□□□□ 0.55
TRA2A-201ENST00000297071 HIST1H2ADP20671 130 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 RHAGQ02094 409 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 ST3GAL4Q11206 333 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 RGNQ15493 299 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CHRNA6Q15825 494 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 IFI44LQ53G44 452 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 RNLSQ5VYX0 342 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 TMC5Q6UXY8 1006 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 RNF19BQ6ZMZ0 732 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 ATCAYQ86WG3 371 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 GOT1L1Q8NHS2 421 aaPredicted RBP18.49■□□□□ 0.55
TRA2A-201ENST00000297071 ASB11Q8WXH4 323 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 COQ8BQ96D53 544 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 HIST1H2AHQ96KK5 128 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 HIST1H2AJQ99878 128 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 H2AFJQ9BTM1 129 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 CENPOQ9BU64 300 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 DUSP26Q9BV47 211 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 BRF2Q9HAW0 419 aa18.49■□□□□ 0.55
TRA2A-201ENST00000297071 GFYI3L273 518 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 SCAMP2O15127 329 aaKnown RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 KIAA0513O60268 411 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 ALPIP09923 528 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 ELAVL2Q12926 359 aaKnown RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 PLEKHS1Q5SXH7 462 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 LRRC66Q68CR7 880 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 ERAP2Q6P179 960 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 VN1R5Q7Z5H4 357 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 METTL3Q86U44 580 aaKnown RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 RTN4RL1Q86UN2 441 aaPredicted RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 CYP4Z2PQ8N1L4 340 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 CLIP4Q8N3C7 705 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 SLC5A8Q8N695 610 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 DCAF4L2Q8NA75 395 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 TRPV1Q8NER1 839 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 TPD52L3Q96J77 140 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 VPS29Q9UBQ0 182 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 BTBD3Q9Y2F9 522 aa18.48■□□□□ 0.55
TRA2A-201ENST00000297071 PRG3Q9Y2Y8 225 aaPredicted RBP18.48■□□□□ 0.55
TRA2A-201ENST00000297071 LOC100506127A0A0U1RQW1 187 aa18.47■□□□□ 0.55
TRA2A-201ENST00000297071 ZNF840PA6NDX5 716 aa18.47■□□□□ 0.55
TRA2A-201ENST00000297071 GFRA2O00451 464 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms