RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RAB36O95755 333 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 MSX1P28360 303 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 DGKGP49619 791 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 SP2Q02086 613 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PTPRCAPQ14761 206 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 MFSD8Q8NHS3 518 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NUSAP1Q9BXS6 441 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 FLRT1Q9NZU1 646 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 TMEM98Q9Y2Y6 226 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 KCTD3Q9Y597 815 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 GLOD5A6NK44 160 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 LCN1P31025 176 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 LUMP51884 338 aaPredicted RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 FKBP1AP62942 108 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NFE2L1Q14494 772 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PCBP1Q15365 356 aaKnown RBP eCLIP15.67■□□□□ 0.15e-6■■■■□ 23.2
SSRP1-202ENST00000293880 VARS2Q5ST30 1063 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 SLC25A25Q6KCM7 469 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 GDF6Q6KF10 455 aaPredicted RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 TESCQ96BS2 214 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 COL1A2P08123 1366 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 A0A1B0GVM2 712 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 ZNF670-ZNF695F2Z2N8 137 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 HTR2BP41595 481 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 RBM34P42696 430 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 FXYD6P3P58550 94 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PLGLB1Q02325 96 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 AIMP2Q13155 320 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PDGFRLQ15198 375 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NAT8LQ8N9F0 302 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 PNLDC1Q8NA58 520 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 OR4F6Q8NGB9 312 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 JPH3Q8WXH2 748 aaPredicted RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 NCSTNQ92542 709 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 BIRC7Q96CA5 298 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 MOCOSQ96EN8 888 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 DPYSL5Q9BPU6 564 aa15.67■□□□□ 0.1
SSRP1-202ENST00000293880 EIF5A2Q9GZV4 153 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 TFB2MQ9H5Q4 396 aaKnown RBP15.67■□□□□ 0.1
SSRP1-202ENST00000293880 M0R233 179 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 HAS3O00219 553 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SSX4O60224 188 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 H1F0P07305 194 aaKnown RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 MATN1P21941 496 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SNRPD2P62316 118 aaKnown RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RABL3Q5HYI8 236 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ZNF648Q5T619 568 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 CERS6Q6ZMG9 384 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 Q8N9G6 341 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SPPL2BQ8TCT7 592 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SLC5A7Q9GZV3 580 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RNF6Q9Y252 685 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ERI3O43414 337 aaKnown RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TACSTD2P09758 323 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 EDNRBP24530 442 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 VIPR1P32241 457 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NSG1P42857 185 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 MEF2AQ02078 507 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TLE2Q04725 743 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SSX2Q16385 188 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 THOC6Q86W42 341 aaKnown RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RASGRP3Q8IV61 690 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 PLD4Q96BZ4 506 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 PRICKLE1Q96MT3 831 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RBCK1Q9BYM8 510 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SIX2Q9NPC8 291 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ENAMQ9NRM1 1142 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 PCDHGB7Q9Y5F8 929 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 G6PDP11413 515 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SLC15A1P46059 708 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 DAOAP59103 153 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 CHRNA6Q15825 494 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TMEM17Q86X19 198 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SLC7A5P1Q8MH63 180 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 DPCDQ9BVM2 203 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RGCCQ9H4X1 137 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NDUFAF4Q9P032 175 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NFATC1O95644 943 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 FGF19O95750 216 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 IFNA21P01568 189 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ZNF35P13682 527 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NKAPLQ5M9Q1 402 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 RNF130Q86XS8 419 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 FANK1Q8TC84 345 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 KLHL6Q8WZ60 621 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TBL1XR1Q9BZK7 514 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 VPS29Q9UBQ0 182 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TEX13DA0A0J9YY54 714 aaPredicted RBP15.66■□□□□ 0.1
SSRP1-202ENST00000293880 LOC730098B7Z3J9 87 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 ESR1P03372 595 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 SMPD1P17405 629 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TM4SF1P30408 202 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 MSS51Q4VC12 460 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 GPR139Q6DWJ6 353 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NIPAL1Q6NVV3 410 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
SSRP1-202ENST00000293880 TBC1D15Q8TC07 691 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms