RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MAGP20916 626 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 CD72P21854 359 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SLC10A2Q12908 348 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 LY6G5CQ5SRR4 150 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 IQCHQ86VS3 1027 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 BBS10Q8TAM1 723 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF420Q8TAQ5 688 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ACOT12Q8WYK0 555 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 THRSPQ92748 146 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 KCNA7Q96RP8 456 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 DCSTAMPQ9H295 470 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SHMT2P34897 504 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 GPR68Q15743 365 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 MEDAGQ5VYS4 303 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF280BQ86YH2 543 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TNFAIP8L1Q8WVP5 186 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 DPYSL5Q9BPU6 564 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 RC3H2Q9HBD1 1191 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 IFT46Q9NQC8 304 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FAM172BPA6NC97 362 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 MTRF1O75570 445 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 OAZ2O95190 189 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 MATN1P21941 496 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FDXRP22570 491 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 HNF1BP35680 557 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 CBLBQ13191 982 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TLR1Q15399 786 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 RNASE12Q5GAN4 147 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 RABL3Q5HYI8 236 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SLC29A4Q7RTT9 530 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 CTU1Q7Z7A3 348 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 CMTR2Q8IYT2 770 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 GRPEL2Q8TAA5 225 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 OR5P2Q8WZ92 322 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 HDAC2Q92769 488 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TAMM41Q96BW9 452 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SHDQ96IW2 340 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 PKP4Q99569 1192 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 NLGN3Q9NZ94 848 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 A0A0J9YVX5 310 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 CPNE3O75131 537 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 EEDO75530 441 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ARHGEF15O94989 841 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 HLA-DPB1P04440 258 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 SLC35E2BP0CK96 405 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 AZGP1P25311 298 aaKnown RBP12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TAS2R43P59537 309 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FADDQ13158 208 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 GKN2Q86XP6 184 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TICAM1Q8IUC6 712 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 OR52E4Q8NGH9 312 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 TMEM74Q96NL1 305 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 FKBP7Q9Y680 259 aa12.39□□□□□ -0.43
PTCD1-201ENST00000292478 A0A0G2JN53 185 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 IQCMA0A1B0GVH7 501 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 EIF3FO00303 357 aaPredicted RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 BEST1O76090 585 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 CYB5AP00167 134 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 OPN1SWP03999 348 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 UNC50Q53HI1 259 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 AQP11Q8NBQ7 271 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 HTRA2O43464 458 aaPredicted RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 VEGFDO43915 354 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 BMP8BP34820 402 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 ABATP80404 500 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 BMP8AQ7Z5Y6 402 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 MINDY1Q8N5J2 469 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 IGSF8Q969P0 613 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 TMEM80Q96HE8 168 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 AIG1Q9NVV5 245 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 SCDO00767 359 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 SOX30O94993 753 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 C6orf47O95873 294 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 JUNP05412 331 aaKnown RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 C1GALT1C1LP0DN25 315 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 AHCYP23526 432 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 ECHS1P30084 290 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 KIAA1161Q6NSJ0 714 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 GRASPQ7Z6J2 395 aaPredicted RBP12.38□□□□□ -0.43
PTCD1-201ENST00000292478 CLIP4Q8N3C7 705 aa12.38□□□□□ -0.43
PTCD1-201ENST00000292478 SETD7Q8WTS6 366 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms