RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TLL1O43897 1013 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SLITRK5O94991 958 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 RAB36O95755 333 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 RAB2AP61019 212 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ADAM8P78325 824 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MINDY4Q4G0A6 757 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PIGGQ5H8A4 983 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 C6orf141Q5SZD1 244 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PRRT2Q7Z6L0 340 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 TMEM126BQ8IUX1 230 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 FOXRED2Q8IWF2 684 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ELMOD2Q8IZ81 293 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SCML4Q8N228 414 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 CEP76Q8TAP6 659 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MCCC1Q96RQ3 725 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ADAMTS10Q9H324 1103 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 RBPJLQ9UBG7 517 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PRNPP04156 253 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SMSP52788 366 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 OR12D2P58182 307 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ST3GAL4Q11206 333 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SPIN4Q56A73 249 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 GALNT10Q86SR1 603 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 BEND7Q8N7W2 519 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 C1orf216Q8TAB5 229 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 RAB8BQ92930 207 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 NUS1Q96E22 293 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 TMEM246Q9BRR3 403 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 CUEDC1Q9NWM3 386 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 UTS2RQ9UKP6 389 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MYH13Q9UKX3 1938 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ENTPD6O75354 484 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PDYNP01213 254 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 ZNF3P17036 446 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PNLIPRP1P54315 467 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 RFTN1Q14699 578 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 FAM110CQ1W6H9 321 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 C6orf136Q5SQH8 315 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 CST11Q9H112 138 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SUV39H2Q9H5I1 410 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MRM3Q9HC36 420 aaKnown RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 NDUFS4O43181 175 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 MT-ND2P03891 347 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PORP16435 677 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 FAM118AQ9NWS6 357 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 IL36AQ9UHA7 158 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC31A1O15431 190 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SNNO75324 88 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC35F1Q5T1Q4 408 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 LRRC66Q68CR7 880 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC25A36Q96CQ1 311 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 FUNDC2Q9BWH2 189 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 HAPLN2Q9GZV7 340 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 LHPPQ9H008 270 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 SMOC2Q9H3U7 446 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 PLEKHA1Q9HB21 404 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 CRTAC1Q9NQ79 661 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 NLE1Q9NVX2 485 aaPredicted RBP14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 GNG8Q9UK08 70 aa14.87□□□□□ -0.03
SHROOM4-201ENST00000289292 A0A1W2PRU2 124 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 B3GALT2O43825 422 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 KCNA5P22460 613 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 GRK6P43250 576 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 ARHGDIBP52566 201 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 MS4A2Q01362 244 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 SPATC1Q76KD6 591 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC30A8Q8IWU4 369 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 LNX2Q8N448 690 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 NDNFQ8TB73 568 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 MRGPRX2Q96LB1 330 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 SMURF1Q9HCE7 757 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 LCHNA4D1U4 455 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 REM1O75628 298 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 CHRNA1P02708 482 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 RPL10P27635 214 aaKnown RBP14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 CCR8P51685 355 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 OR4D1Q15615 310 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 PRAMEF14Q5SWL7 426 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 PRAMEF13Q5VWM6 474 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 RAB12Q6IQ22 244 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 GPRIN1Q7Z2K8 1008 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 NPAS3Q8IXF0 933 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 DNAJA4Q8WW22 397 aaPredicted RBP14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 NCSTNQ92542 709 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 ZSWIM3Q96MP5 696 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 DEFB118Q96PH6 123 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 ASPNQ9BXN1 380 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 MKLN1Q9UL63 735 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 MYH7BA7E2Y1 1941 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 SERPINA3P01011 423 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 CLCN2P51788 898 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 GK3PQ14409 553 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 ABRAXAS2Q15018 415 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 EXOC3L2Q2M3D2 409 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 AMIGO1Q86WK6 493 aa14.86□□□□□ -0.03
SHROOM4-201ENST00000289292 MAPKAP1Q9BPZ7 522 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms