RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 KCNJ11Q14654 390 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 USP10Q14694 798 aaKnown RBP10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 ABRAXAS2Q15018 415 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 KLHL38Q2WGJ6 581 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 PCID2Q5JVF3 399 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 THEMIS2Q5TEJ8 643 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 PDSS2Q86YH6 399 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 MPP5Q8N3R9 675 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 KIF2BQ8N4N8 673 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 ZCCHC10Q8TBK6 192 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 FAM57AQ8TBR7 257 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 LPGAT1Q92604 370 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 TSLPQ969D9 159 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 PRAP1Q96NZ9 151 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 LPAR4Q99677 370 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 OLFM1Q99784 485 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 ZNF559Q9BR84 538 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 FAM114A2Q9NRY5 505 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 HRH3Q9Y5N1 445 aa10.09□□□□□ -0.79
NSMCE2-201ENST00000287437 SCN2AQ99250 2005 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ZNF860A6NHJ4 632 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ZNF839A8K0R7 811 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 FOXO6A8MYZ6 492 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 GOLGA8KD6RF30 607 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 GOLGA8TH3BQL2 631 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 TFECO14948 347 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 RDH16O75452 317 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 SYF2O95926 243 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CATP04040 527 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CHRM3P20309 590 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ARNTP27540 789 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 MSX1P28360 303 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 TPP2P29144 1249 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 STIP1P31948 543 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 PTGS2P35354 604 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CYLC1P35663 651 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 HSD17B2P37059 387 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 IST1P53990 364 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 SLC26A5P58743 744 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 RHAGQ02094 409 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 NSDHLQ15738 373 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 PEX26Q7Z412 305 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 RPS19BP1Q86WX3 136 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ZNF227Q86WZ6 799 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 LGI4Q8N135 537 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 RPRMLQ8N4K4 120 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ASB5Q8WWX0 329 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 PEX11GQ96HA9 241 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CCDC138Q96M89 665 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 EBNA1BP2Q99848 306 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 LACRTQ9GZZ8 138 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ANKHQ9HCJ1 492 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 RNF6Q9Y252 685 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 CRYL1Q9Y2S2 319 aa10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-201ENST00000287437 SPG11Q96JI7 2443 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 NIPBLQ6KC79 2804 aaeCLIP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 H3BMM5 538 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 LIASO43766 372 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 HS6ST1O60243 411 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 TOXO94900 526 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 VAPBO95292 243 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 FTCDO95954 541 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 ESR1P03372 595 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 CHRNB4P30926 498 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 CYB561P49447 251 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 MEOX1P50221 254 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 ITGA8P53708 1063 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 OR4D2P58180 307 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 RPS15AP62244 130 aaKnown RBP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 MYBPHQ13203 477 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 OASLQ15646 514 aaKnown RBP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 TYSND1Q2T9J0 566 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 MRNIPQ6NTE8 343 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 CES3Q6UWW8 571 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 PCGF5Q86SE9 256 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 TGIF2LYQ8IUE0 185 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 CCDC71Q8IV32 467 aaPredicted RBP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 LRRC56Q8IYG6 542 aaPredicted RBP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 UBL4BQ8N7F7 174 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 KCT2Q8NC54 265 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 PLPP5Q8NEB5 264 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 OR5T3Q8NGG3 340 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 LILRB4Q8NHJ6 448 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 ELP5Q8TE02 316 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 TMEM125Q96AQ2 219 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 MFSD3Q96ES6 412 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 SLC30A3Q99726 388 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 KCNJ16Q9NPI9 418 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 LANCL2Q9NS86 450 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 AMFRQ9UKV5 643 aa10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
NSMCE2-201ENST00000287437 NAALAD2Q9Y3Q0 740 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms