RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LBPP18428 481 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 TGM1P22735 817 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 PRPH2P23942 346 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 AHRP35869 848 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 RPS13P62277 151 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 AP5B1Q2VPB7 878 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 C6orf136Q5SQH8 315 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 OGFOD2Q6N063 350 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 MFSD9Q8NBP5 474 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 IFI44Q8TCB0 444 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 NSL1Q96IY1 281 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 CNDP2Q96KP4 475 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 TUBB6Q9BUF5 446 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 PRM3Q9NNZ6 103 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 TXLNGQ9NUQ3 528 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 VPS29Q9UBQ0 182 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 PILRAQ9UKJ1 303 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 G3BP2Q9UN86 482 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 PCDHGA4Q9Y5G9 962 aa18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 SNRNP200O75643 2136 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-202ENST00000284770 SLC9B1P1A6NJY1 282 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 DLL1O00548 723 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 SLC22A2O15244 555 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 KIF1CO43896 1103 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CTSVO60911 334 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ATP5HO75947 161 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 LDOC1O95751 146 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 C9P02748 559 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CKMT2P17540 419 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ADSLP30566 484 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 KLF10Q13118 480 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ZIC1Q15915 447 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 USP53Q70EK8 1073 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CARFQ8N187 725 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ACTR5Q9H9F9 607 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 LRTM1Q9HBL6 345 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 NMRK1Q9NWW6 199 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 AP1M2Q9Y6Q5 423 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CAPN7Q9Y6W3 813 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 MN1Q10571 1320 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 PRAMEF10O60809 474 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CLEC3AO75596 197 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ETHE1O95571 254 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 TGFB1P01137 390 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 PTX3P26022 381 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CSF2RBP32927 897 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 SMU1Q2TAY7 513 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 RFTN2Q52LD8 501 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 PRR23CQ6ZRP0 262 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 C19orf47Q8N9M1 422 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 TRPV3Q8NET8 790 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 THAP11Q96EK4 314 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 CMTM7Q96FZ5 175 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 OR2A5Q96R48 311 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ZFYVE21Q9BQ24 234 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 ZMYND15Q9H091 742 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 C1orf109Q9NX04 203 aa18.09■□□□□ 0.49
PDLIM3-202ENST00000284770 SEC22BO75396 215 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 TBX6O95947 436 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 CALB2P22676 271 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 ERVK-8P63133 956 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 CYP4F2P78329 520 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 CCL7P80098 99 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 EMX2Q04743 252 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 CYP4F3Q08477 520 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 KIAA0040Q15053 153 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 AASDHQ4L235 1098 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 RNF44Q7L0R7 432 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 SPATA19Q7Z5L4 167 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 FNDC5Q8NAU1 212 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 CREB3L4Q8TEY5 395 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 SLC7A6OSQ96CW6 309 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 TCTN2Q96GX1 697 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 METTL2AQ96IZ6 378 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 FCRL4Q96PJ5 515 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 SERPINI1Q99574 410 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 OR51B5Q9H339 312 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 SYNPO2LQ9H987 977 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 FTSJ1Q9UET6 329 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 TAGLN3Q9UI15 199 aa18.08■□□□□ 0.48
PDLIM3-202ENST00000284770 A0A0J9YVX5 310 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 A0A1W2PQM1 296 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CASC3O15234 703 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 FOXD2O60548 495 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 RPLP0P05388 317 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CD1EP15812 388 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 ACP1P24666 158 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 ATP4BP51164 291 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CUL3Q13618 768 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 TMEM71Q6P5X7 295 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 ASRGL1Q7L266 308 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 ZFAND4Q86XD8 727 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 MS4A8Q9BY19 250 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 LRRN3Q9H3W5 708 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 MRGBPQ9NV56 204 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 SEMA5BQ9P283 1151 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 KLHL3Q9UH77 587 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 C4orf47A7E2U8 309 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 SH3BP5O60239 455 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms