RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CHFRQ96EP1 664 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 P2RY13Q9BPV8 354 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 KXD1Q9BQD3 176 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 KLHL25Q9H0H3 589 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 C1orf109Q9NX04 203 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 DKK3Q9UBP4 350 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 PCDHB14Q9Y5E9 798 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 U3KQV3 271 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 TSPAN6O43657 245 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 ERN1O75460 977 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 FMO3P31513 532 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 PREPP48147 710 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 PPP5CP53041 499 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 ZNF284Q2VY69 593 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 PGS1Q32NB8 556 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 LRRK1Q38SD2 2015 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 DEPDC1Q5TB30 811 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 SYCE2Q6PIF2 218 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 MMAAQ8IVH4 418 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 NETO1Q8TDF5 533 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 MTFMTQ96DP5 389 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 FAM129BQ96TA1 746 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 RPP25Q9BUL9 199 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 EPS8L2Q9H6S3 715 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 SP140LQ9H930 580 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 CPNE5Q9HCH3 593 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 COL4A3Q01955 1670 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 EPORP19235 508 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 CD40LGP29965 261 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 PBLDP30039 288 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 OPRD1P41143 372 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 IL12RB1P42701 662 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 WASP42768 502 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 GZMMP51124 257 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 DCDC1P59894 354 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 LSM3P62310 102 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 TMEM236Q5W0B7 351 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ERAP2Q6P179 960 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 DNAJC14Q6Y2X3 702 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 LIX1Q8N485 282 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 RHOXF1Q8NHV9 184 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 BTN2A2Q8WVV5 523 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 FAM120BQ96EK7 910 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 LRIG1Q96JA1 1093 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 OR52E6Q96RD3 313 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 APOL4Q9BPW4 351 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ZSCAN5AQ9BUG6 496 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 SLIRPQ9GZT3 109 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 SACM1LQ9NTJ5 587 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 KLQ9UEF7 1012 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ISPDA4D126 451 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 RGS10O43665 173 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 MITFO75030 526 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 STK16O75716 305 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 WDR47O94967 919 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 PSMB9P28065 219 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ALDH4A1P30038 563 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 GNPDA1P46926 289 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 MASP1P48740 699 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ARHGDIAP52565 204 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 HMGCS1Q01581 520 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 FADDQ13158 208 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 GBX1Q14549 363 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 CYP2U1Q7Z449 544 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 SLC22A16Q86VW1 577 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 CYP4Z1Q86W10 505 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ASB11Q8WXH4 323 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 CPPED1Q9BRF8 314 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 ATG10Q9H0Y0 220 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 RDH14Q9HBH5 336 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 THG1LQ9NWX6 298 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 OSGIN1Q9UJX0 560 aa17.67■□□□□ 0.42
PDLIM3-201ENST00000284767 MMP20O60882 483 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 MYO1DO94832 1006 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ANXA5P08758 320 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 CBSLP0DN79 551 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 CBSP35520 551 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 HNRNPFP52597 415 aaKnown RBP17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ABRQ12979 859 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 KCNJ8Q15842 424 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 LRIF1Q5T3J3 769 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ARMC8Q8IUR7 673 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 HOMEZQ8IX15 550 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 PHACTR4Q8IZ21 702 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 GLYATL1Q969I3 302 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 SLX1AQ9BQ83 275 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ALOXE3Q9BYJ1 711 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 DSN1Q9H410 356 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 RIBC2Q9H4K1 309 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ZFP14Q9HCL3 533 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ACOT13Q9NPJ3 140 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 DNAH14Q0VDD8 3507 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 CLDN24A6NM45 220 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 WNT9AO14904 365 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 NUAK1O60285 661 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 SOD1P00441 154 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 MT-ND2P03891 347 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 PRNPP04156 253 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 SERPINB1P30740 379 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 GJA4P35212 333 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms