RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CREB3L1Q96BA8 519 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 NSUN5Q96P11 429 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 ALPK1Q96QP1 1244 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 BRD7Q9NPI1 651 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MKS1Q9NXB0 559 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MAU2Q9Y6X3 613 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SERPINA3P01011 423 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 JUNP05412 331 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 DNAJB1P25685 340 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MAP2K4P45985 399 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 GBX2P52951 348 aaPredicted RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 JAG1P78504 1218 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC3A1Q07837 685 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 GRB7Q14451 532 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 C6orf136Q5SQH8 315 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 CGB2Q6NT52 195 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 CEACAM20Q6UY09 585 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SNX29P2Q8IUI4 249 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 CHPT1Q8WUD6 406 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SMOQ99835 787 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MAPKAP1Q9BPZ7 522 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 P2RX2Q9UBL9 471 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 EDARQ9UNE0 448 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 CNTN5O94779 1100 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 DNAJB13P59910 316 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 VLDLRP98155 873 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 GFOD2Q3B7J2 385 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 DNAJA4Q8WW22 397 aaPredicted RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SMG7Q92540 1137 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC29A3Q9BZD2 475 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MKRN2Q9H000 416 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 PCBD2Q9H0N5 130 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 TM9SF3Q9HD45 589 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 FKBP14Q9NWM8 211 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 C2orf92A0A1B0GVN3 265 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 E7ESA3 106 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 APODP05090 189 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 MPIP34949 423 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SPIN4Q56A73 249 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 NPAS4Q8IUM7 802 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF676Q8N7Q3 588 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 GOLM1Q8NBJ4 401 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 C14orf119Q9NWQ9 140 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 QPCTLQ9NXS2 382 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 CMAHPQ9Y471 501 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 STATHP02808 62 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ARHGAP1Q07960 439 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 USF2Q15853 346 aaPredicted RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 PRSS58Q8IYP2 241 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 GRHL3Q8TE85 626 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 CDH7Q9ULB5 785 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 MYH8P13535 1937 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 IGFBP4P22692 258 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 GRIA2P42262 883 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 OR1E2P47887 323 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 PGDP52209 483 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 SMSP52788 366 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 AP1S2P56377 157 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 GABARAPL2P60520 117 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 INCA1Q0VD86 236 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 CARD16Q5EG05 197 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 HTATIP2Q9BUP3 242 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 BEX1Q9HBH7 125 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 MRPS30Q9NP92 439 aaKnown RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 PTGDR2Q9Y5Y4 395 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 METTL21EPA6NDL7 271 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 C5orf51A6NDU8 294 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 NFATC1O95644 943 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 CSNK2A2P19784 350 aaPredicted RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 KCNA5P22460 613 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ADAM15Q13444 863 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 PTGR1Q14914 329 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 NDUFA9Q16795 377 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 UGT8Q16880 541 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 CYP27C1Q4G0S4 372 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ZCCHC12Q6PEW1 402 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 HAGHLQ6PII5 290 aaPredicted RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF627Q7L945 461 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 THOC6Q86W42 341 aaKnown RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ACDQ96AP0 544 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 SAV1Q9H4B6 383 aaPredicted RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 DUS2Q9NX74 493 aaKnown RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 A0A1W2PRQ8 180 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 LDOC1O95751 146 aaPredicted RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 PRH1P02810 166 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 LCN1P31025 176 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 DGKGP49619 791 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 MAN2A2P49641 1150 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 GDI2P50395 445 aaKnown RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 EIPR1Q53HC9 387 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 CYBRD1Q53TN4 286 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 TCEANCQ8N8B7 351 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 OR13J1Q8NGT2 312 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 LGR4Q9BXB1 951 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 RC3H2Q9HBD1 1191 aaKnown RBP15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF69Q9UC07 566 aa15.96■□□□□ 0.15
SH3RF1-201ENST00000284637 HLA-DPB1P04440 258 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms