RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
SDE2-201ENST00000272091 FBXL21Q9UKT6 434 aa11.62□□□□□ -0.55
SDE2-201ENST00000272091 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
SDE2-201ENST00000272091 HEBP2Q9Y5Z4 205 aa11.62□□□□□ -0.55
SDE2-201ENST00000272091 PLPP1O14494 284 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 PRMT3O60678 531 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 THEGLP0DJG4 465 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 F3P13726 295 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 NCK1P16333 377 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 VHLP40337 213 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 GZMMP51124 257 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 SLC14A1Q13336 389 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 LCN8Q6JVE9 175 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 ZNF551Q7Z340 670 aaPredicted RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 SPATA24Q86W54 205 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 KRT78Q8N1N4 520 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 OR2L3Q8NG85 312 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 CREB3L4Q8TEY5 395 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 ZNF583Q96ND8 569 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 CPPED1Q9BRF8 314 aaPredicted RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 TBC1D17Q9HA65 648 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 MRPS17Q9Y2R5 130 aaKnown RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 A0A096LPI6 279 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 TCRBV5S2A0A599 114 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 BTN3A3O00478 584 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 RHDQ02161 417 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 KRT33BQ14525 404 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 MUM1Q2TAK8 710 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 KIAA1614Q5VZ46 1190 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 CAMKMTQ7Z624 323 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 SLC9B2Q86UD5 537 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 FAM9CQ8IZT9 166 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 OR8J2Q8NGG1 315 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 ZUFSPQ96AP4 578 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 CLDN23Q96B33 292 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 AURKBQ96GD4 344 aaPredicted RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 AIF1LQ9BQI0 150 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 AXIN1O15169 862 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 ZNF217O75362 1048 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 GSNP06396 782 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 TPP2P29144 1249 aaPredicted RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 SOX11P35716 441 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 BCL6P41182 706 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 MC1RQ01726 317 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 BNIP2Q12982 314 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 LPCAT4Q643R3 524 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 UBE3DQ7Z6J8 389 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 MMP21Q8N119 569 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 CDC26Q8NHZ8 85 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 KCTD14Q9BQ13 255 aaPredicted RBP11.61□□□□□ -0.55
SDE2-201ENST00000272091 KLHL20Q9Y2M5 609 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 LRRC42Q9Y546 428 aa11.61□□□□□ -0.55
SDE2-201ENST00000272091 C4orf51C9J302 202 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 HAT1O14929 419 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 CHRM5P08912 532 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 HNRNPFP52597 415 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 HYAL2Q12891 473 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 MPEG1Q2M385 716 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 MSANTD1Q6ZTZ1 278 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 LPCAT2Q7L5N7 544 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 GPR155Q7Z3F1 870 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 IFNEQ86WN2 208 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 SPPL2CQ8IUH8 684 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PHACTR4Q8IZ21 702 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 CLECL1Q8IZS7 167 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 OR4E2Q8NGC2 313 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 C16orf78Q8WTQ4 265 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 SNX19Q92543 992 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 F2RL3Q96RI0 385 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 COLEC10Q9Y6Z7 277 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 C15orf38-AP3S2A0A0A6YYH1 394 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 COX7A2P14406 83 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PTX3P26022 381 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 HTR1EP28566 365 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 BSGP35613 385 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 CYP4F3Q08477 520 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ZNF763Q0D2J5 394 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 KHDRBS2Q5VWX1 349 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 FAM71E1Q6IPT2 247 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 IYDQ6PHW0 289 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ARPINQ7Z6K5 226 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 AMIGO1Q86WK6 493 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PQLC1Q8N2U9 271 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 RAB42Q8N4Z0 105 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 TMEM102Q8N9M5 508 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 PJA1Q8NG27 643 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ZNF570Q96NI8 536 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PKP2Q99959 881 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 TAAR2Q9P1P5 351 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 MDC1Q14676 2089 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 A0A1W2PR77 199 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 RTCAO00442 366 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 MYO1DO94832 1006 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 TNFP01375 233 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms