RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TSEN54Q7Z6J9 526 aaKnown RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 TMEM150AQ86TG1 271 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ALG14Q96F25 216 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 OTUB1Q96FW1 271 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 DMRTB1Q96MA1 342 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DUSP26Q9BV47 211 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ACAT2Q9BWD1 397 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ITPAQ9BY32 194 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 SGK2Q9HBY8 427 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DSCR3O14972 297 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 TPST2O60704 377 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 PQBP1O60828 265 aaKnown RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 TGFB1P01137 390 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 MAGEA2P43356 314 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 MXD1Q05195 221 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ST3GAL4Q11206 333 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 CDKN3Q16667 212 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 EXOC3L2Q2M3D2 409 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 RFX4Q33E94 735 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 TPRG1LQ5T0D9 272 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ARMC8Q8IUR7 673 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 TSEN34Q9BSV6 310 aaKnown RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 MAGIXQ9H6Y5 334 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 NECTIN3Q9NQS3 549 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 B4GALT6Q9UBX8 382 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DNMT3AQ9Y6K1 912 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 PRAMEF25A6NGN4 478 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 M0QX08 132 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 TFECO14948 347 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 SCN2BO60939 215 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 GCM2O75603 506 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 SOAT1P35610 550 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ETV3P41162 512 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 EIF2DP41214 584 aaKnown RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 PFN3P60673 137 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 KCNJ10P78508 379 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DBPQ10586 325 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 ZNF385BQ569K4 471 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 ARMCX4Q5H9R4 360 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 RETSATQ6NUM9 610 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 NEK10Q6ZWH5 1172 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 RNF180Q86T96 592 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 TCAIMQ8N3R3 496 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 OR4A15Q8NGL6 344 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 NFKBIDQ8NI38 313 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 S100ZQ8WXG8 99 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 VMP1Q96GC9 406 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 C2orf49Q9BVC5 232 aaPredicted RBP16.2■□□□□ 0.18
SQLE-201ENST00000265896 BRD9Q9H8M2 597 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 C11orf16Q9NQ32 467 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 DNAJC11Q9NVH1 559 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 MS4A12Q9NXJ0 267 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 C5AR2Q9P296 337 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 VPS29Q9UBQ0 182 aa16.2■□□□□ 0.18
SQLE-201ENST00000265896 KCNE1BA0A087WTH5 132 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 IGHA2P01877 340 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 PDHA2P29803 388 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 NKX3-2P78367 333 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 TAB1Q15750 504 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 FAM214AQ32MH5 1076 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 MACC1Q6ZN28 852 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 TSPYL5Q86VY4 417 aaPredicted RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 ZNF675Q8TD23 568 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 PLD4Q96BZ4 506 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 LINC00597Q9H2U6 94 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 OR51B5Q9H339 312 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 MANSC4A6NHS7 340 aaPredicted RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 ACVR2AP27037 513 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 TUFMP49411 452 aaKnown RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 CPTPQ5TA50 214 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CHST9Q7L1S5 443 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 WDR53Q7Z5U6 358 aaPredicted RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 TMPRSS11BQ86T26 416 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 PARP16Q8N5Y8 322 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CELF5Q8N6W0 485 aaKnown RBP16.19■□□□□ 0.18
SQLE-201ENST00000265896 OR10G2Q8NGC3 310 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 ATL1Q8WXF7 558 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CMTM7Q96FZ5 175 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 PKP4Q99569 1192 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CORO1BQ9BR76 489 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CCM2Q9BSQ5 444 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 EHD1Q9H4M9 534 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 CTPS2Q9NRF8 586 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 RAB23Q9ULC3 237 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 SH2B3Q9UQQ2 575 aa16.19■□□□□ 0.18
SQLE-201ENST00000265896 MGAT4DA6NG13 374 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 RFPL2O75678 378 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 SLC16A8O95907 504 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 HOXB9P17482 250 aaPredicted RBP16.18■□□□□ 0.18
SQLE-201ENST00000265896 SERPINA4P29622 427 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 CTSKP43235 329 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 PPIGQ13427 754 aaKnown RBP eCLIP16.18■□□□□ 0.18
SQLE-201ENST00000265896 INO80DQ53TQ3 878 aaPredicted RBP16.18■□□□□ 0.18
SQLE-201ENST00000265896 ZMAT1Q5H9K5 638 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 PRSS48Q7RTY5 328 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 LGI4Q8N135 537 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 OR8H2Q8N162 312 aa16.18■□□□□ 0.18
SQLE-201ENST00000265896 CYP4Z2PQ8N1L4 340 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms