RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 COPG2Q9UBF2 871 aa17.51■□□□□ 0.39
SDF4-201ENST00000263741 RUVBL1Q9Y265 456 aaKnown RBP17.51■□□□□ 0.39
SDF4-201ENST00000263741 TRBC2A0A5B9 178 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 SUPT7LO94864 414 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 SERPIND1P05546 499 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 CCR10P46092 362 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 MNAT1P51948 309 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 PRKAA2P54646 552 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 LACTB2Q53H82 288 aaPredicted RBP17.5■□□□□ 0.39
SDF4-201ENST00000263741 ZNF678Q5SXM1 525 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 C10orf107Q8IVU9 208 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 CCNYL1Q8N7R7 359 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 ZNF483Q8TF39 744 aaPredicted RBP17.5■□□□□ 0.39
SDF4-201ENST00000263741 CLIP3Q96DZ5 547 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 ZNF285Q96NJ3 590 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 SLC7A5P2Q9GIP4 190 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 MRPS2Q9Y399 296 aaKnown RBP17.5■□□□□ 0.39
SDF4-201ENST00000263741 ZZEF1O43149 2961 aa17.5■□□□□ 0.39
SDF4-201ENST00000263741 DLGAP3O95886 979 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 SRSF6Q13247 344 aaKnown RBP17.49■□□□□ 0.39
SDF4-201ENST00000263741 MPP2Q14168 576 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 RBBP7Q16576 425 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 MFSD9Q8NBP5 474 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 OR8K5Q8NH50 307 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 ZPBPQ9BS86 351 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 SPRY4Q9C004 299 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 ACTR8Q9H981 624 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 KCNK9Q9NPC2 374 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 STMND1H3BQB6 276 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 CPNE3O75131 537 aaKnown RBP17.49■□□□□ 0.39
SDF4-201ENST00000263741 SCTRP47872 440 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 PIK3CGP48736 1102 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 PCBP4P57723 403 aaKnown RBP17.49■□□□□ 0.39
SDF4-201ENST00000263741 RNF175Q8N4F7 328 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 ZCCHC10Q8TBK6 192 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 TRPC4APQ8TEL6 797 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 FGF11Q92914 225 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 PTCD3Q96EY7 689 aaKnown RBP17.49■□□□□ 0.39
SDF4-201ENST00000263741 C10orf90Q96M02 699 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 RAXQ9Y2V3 346 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 RNF11Q9Y3C5 154 aa17.49■□□□□ 0.39
SDF4-201ENST00000263741 TMEM184BQ9Y519 407 aaPredicted RBP17.49■□□□□ 0.39
SDF4-201ENST00000263741 NDUFS4O43181 175 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 SRPX2O60687 465 aaPredicted RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 WFS1O76024 890 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 TRAF3Q13114 568 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 SLC9A5Q14940 896 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 SWT1Q5T5J6 900 aaKnown RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 LCN10Q6JVE6 187 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 FAM199XQ6PEV8 388 aaPredicted RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 TMIGD1Q6UXZ0 262 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 TTLL10Q6ZVT0 673 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ASPGQ86U10 573 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 VASH2Q86V25 355 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 BPHLQ86WA6 291 aaPredicted RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 SLC22A9Q8IVM8 553 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 KCT2Q8NC54 265 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 RDH11Q8TC12 318 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 PPP4R1Q8TF05 950 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ATP6V1E2Q96A05 226 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 L3HYPDHQ96EM0 354 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 NDOR1Q9UHB4 597 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ZNF490Q9ULM2 529 aaPredicted RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 PCDHB3Q9Y5E6 796 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 HYKKA2RU49 373 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 RAD1O60671 282 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 IMPDH1P20839 514 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ALDH3A1P30838 453 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 CCNG1P51959 295 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 NAGLUP54802 743 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 RELAQ04206 551 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 GRM7Q14831 915 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 PRTGQ2VWP7 1150 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 TCTE1Q5JU00 501 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 TLDC1Q6P9B6 456 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ANKRD42Q8N9B4 389 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 CCT6BQ92526 530 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 WDR34Q96EX3 536 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 ZNF317Q96PQ6 595 aaPredicted RBP17.48■□□□□ 0.39
SDF4-201ENST00000263741 NDC1Q9BTX1 674 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 C1QTNF3Q9BXJ4 246 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 EHD1Q9H4M9 534 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 GSTO2Q9H4Y5 243 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 CUTCQ9NTM9 273 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 OXSMQ9NWU1 459 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 DKK4Q9UBT3 224 aa17.48■□□□□ 0.39
SDF4-201ENST00000263741 USP24Q9UPU5 2620 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 TAF4O00268 1085 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 H2AFYO75367 372 aaKnown RBP17.47■□□□□ 0.39
SDF4-201ENST00000263741 ALAS2P22557 587 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 HNF4AP41235 474 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 ETV4P43268 484 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 GCGRP47871 477 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 CLCQ05315 142 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 CPSF6Q16630 551 aaKnown RBP eCLIP17.47■□□□□ 0.39
SDF4-201ENST00000263741 ZCCHC23Q6ZST2 131 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 VN1R5Q7Z5H4 357 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 TTC29Q8NA56 475 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms