RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ST6GALNAC4Q9H4F1 302 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 DEC1Q9P2X7 70 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 UTS2RQ9UKP6 389 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 CD8B2A6NJW9 211 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 TEX46H3BTG2 121 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 B3GALT2O43825 422 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 SLITRK5O94991 958 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 POP4O95707 220 aaKnown RBP11.71□□□□□ -0.54
SMG6-201ENST00000263073 CD8BP10966 210 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 ACP5P13686 325 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 ST3GAL4Q11206 333 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 CYBRD1Q53TN4 286 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 FRG2Q64ET8 278 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 THOC6Q86W42 341 aaKnown RBP11.71□□□□□ -0.54
SMG6-201ENST00000263073 DRAXINQ8NBI3 349 aaPredicted RBP11.71□□□□□ -0.54
SMG6-201ENST00000263073 FRG2BQ96QU4 278 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 TAPBPLQ9BX59 468 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 ASPNQ9BXN1 380 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 ZIM2Q9NZV7 527 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 CDC14AQ9UNH5 594 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 TLL1O43897 1013 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 SOX2P48431 317 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 FXYD6P3P58550 94 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 SLC15A4Q8N697 577 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 PQLC3Q8N755 202 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 SAMD12Q8N8I0 201 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 RDH12Q96NR8 316 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 DPH2Q9BQC3 489 aaPredicted RBP11.71□□□□□ -0.54
SMG6-201ENST00000263073 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 P2RX2Q9UBL9 471 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.54
SMG6-201ENST00000263073 M0R233 179 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 AKAP8O43823 692 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 RLN2P04090 185 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 CTSOP43234 321 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 MAGEA8P43361 318 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 KCNQ1P51787 676 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SP2Q02086 613 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 PTGR1Q14914 329 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 EIF2S3LQ2VIR3 472 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 SPIN3Q5JUX0 258 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 C22orf42Q6IC83 251 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 FBXL22Q6P050 247 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 HAGHLQ6PII5 290 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 TMEM145Q8NBT3 493 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SRFBP1Q8NEF9 429 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 THAP6Q8TBB0 222 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 ERI3O43414 337 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 DFNA5O60443 496 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 ITGA10O75578 1167 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SMSP52788 366 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SLC18A1P54219 525 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 PMS2P3Q13401 168 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 MOGSQ13724 837 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 NCEH1Q6PIU2 408 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 C15orf52Q6ZUT6 534 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GPR22Q99680 433 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 SLC32A1Q9H598 525 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 TMEM88BA6NKF7 163 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 PPM1BO75688 479 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 RENP00797 406 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 MTFR2Q6P444 385 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 OTOP2Q7RTS6 562 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 BEND7Q8N7W2 519 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 STOML3Q8TAV4 291 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 DUS2Q9NX74 493 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 ZNF510Q9Y2H8 683 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 KIF13AQ9H1H9 1805 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 A0A0J9YVX5 310 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 KLF11O14901 512 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 NCS1P62166 190 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 KCNC4Q03721 635 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GPALPP1Q8IXQ4 340 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 DENND6BQ8NEG7 585 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 ZFAND2BQ8WV99 257 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 C7orf34Q96L11 122 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 MKKSQ9NPJ1 570 aaPredicted RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 METTL21EPA6NDL7 271 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 CD2P06729 351 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GRPRP30550 384 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GDI2P50395 445 aaKnown RBP11.7□□□□□ -0.54
SMG6-201ENST00000263073 LRRC32Q14392 662 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GTF2IRD2BQ6EKJ0 949 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 GTF2IRD2Q86UP8 949 aa11.7□□□□□ -0.54
SMG6-201ENST00000263073 IRAK2O43187 625 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 RAB36O95755 333 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ASGR1P07306 291 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms