RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CIDECQ96AQ7 238 aaPredicted RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 TMEM246Q9BRR3 403 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 SORBS1Q9BX66 1292 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 ZFYVE1Q9HBF4 777 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 RANGRFQ9HD47 186 aaPredicted RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 NDRG4Q9ULP0 352 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 MTMR11A4FU01 709 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 MAGEB17A8MXT2 336 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 TNFRSF11BO00300 401 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 TSC22D2O75157 780 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 EPN2O95208 641 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 AKR1A1P14550 325 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 ELNP15502 786 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 DNAJA1P31689 397 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 CCR7P32248 378 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 CSKP41240 450 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 NFATC2Q13469 925 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 BCL2A1Q16548 175 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 ALG1LQ6GMV1 187 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 FAM124AQ86V42 546 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 CAMKK1Q8N5S9 505 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 IQCF1Q8N6M8 205 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 GPR26Q8NDV2 337 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 CNDP2Q96KP4 475 aaKnown RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 ADGRE3Q9BY15 652 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
SNX1-201ENST00000261889 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
SNX1-201ENST00000261889 A0A1B0GVC2 190 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 A6NIN4 97 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ALOX5P09917 674 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 SOAT1P35610 550 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 HNF1BP35680 557 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 PREPP48147 710 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 NRIP1P48552 1158 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TOP3AQ13472 1001 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 ACOX1Q15067 660 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.41e-12■□□□□ 8.4
SNX1-201ENST00000261889 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 CAPN13Q6MZZ7 669 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 NOXRED1Q6NXP6 359 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 PHF10Q8WUB8 498 aaKnown RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 P2RY12Q9H244 342 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 KLHL20Q9Y2M5 609 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ILVBLA1L0T0 632 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 H3BNC9 293 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 NTN1O95631 604 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 HLA-EP13747 358 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 FPR1P21462 350 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 CTSOP43234 321 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 RGS4P49798 205 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 DSC3Q14574 896 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TAF12Q16514 161 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TBRG1Q3YBR2 411 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 Q5BKY6 102 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 RPS26P11Q5JNZ5 115 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 B3GLCTQ6Y288 498 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ZNF366Q8N895 744 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 NAALAD2Q9Y3Q0 740 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 PRAMEF25A6NGN4 478 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 NPIPB15A6NHN6 443 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 DYRK3O43781 588 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 CR2P20023 1033 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 DGKKQ5KSL6 1271 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 CCDC80Q76M96 950 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 GALNT7Q86SF2 657 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 LGI4Q8N135 537 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 OR10G2Q8NGC3 310 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 GFM1Q96RP9 751 aaKnown RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 SDHCQ99643 169 aaPredicted RBP12.53□□□□□ -0.4
SNX1-201ENST00000261889 TRIM62Q9BVG3 475 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 C8orf4Q9NR00 106 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
SNX1-201ENST00000261889 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 TRIOO75962 3097 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 F11P03951 625 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 RETP07949 1114 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 CD22P20273 847 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms