RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LOC100130705A0A1B0GUX0 176 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 FGF18O76093 207 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF806P0C7X5 589 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 TPTEP56180 551 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 CDK6Q00534 326 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 KLHDC10Q6PID8 442 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM156Q8N614 296 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 RAB2BQ8WUD1 216 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 SLC35F5Q8WV83 523 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 CAMK1GQ96NX5 476 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 UCK2Q9BZX2 261 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 GPR88Q9GZN0 384 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 CDC14AQ9UNH5 594 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 L7N2F9 121 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 VAMP2P63027 116 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 WSCD2Q2TBF2 565 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PTCHD3Q3KNS1 767 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 EOGTQ5NDL2 527 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 PNLDC1Q8NA58 520 aaKnown RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 GATSQ8NAP1 163 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 SH3YL1Q96HL8 342 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-201ENST00000261037 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
COL8A1-201ENST00000261037 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 COQ9O75208 318 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 CBSLP0DN79 551 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 CBSP35520 551 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 BLMHQ13867 455 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 BPIFB1Q8TDL5 484 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 KLHL6Q8WZ60 621 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 XKR8Q9H6D3 395 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 VNN3Q9NY84 501 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 FARSAQ9Y285 508 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MAU2Q9Y6X3 613 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 NID2Q14112 1375 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF670-ZNF695F2Z2N8 137 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TSPAN4O14817 238 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 IL33O95760 270 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MRPL3P09001 348 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 OR2T5Q6IEZ7 315 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 OR2T29Q8NH02 315 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 PYURFQ96I23 114 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 C12orf42Q96LP6 360 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ERMAPQ96PL5 475 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 FETUBQ9UGM5 382 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MUSKO15146 869 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 PIGRP01833 764 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 HCKP08631 526 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 HAPLN1P10915 354 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 OR1E2P47887 323 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 JAG1P78504 1218 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 HERC3Q15034 1050 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ANO7Q6IWH7 933 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 FBXL20Q96IG2 436 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TUBGCP5Q96RT8 1024 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ITPAQ9BY32 194 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 SDHAF3Q9NRP4 125 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MEMO1Q9Y316 297 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MTMR11A4FU01 709 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF860A6NHJ4 632 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 WASHC1A8K0Z3 465 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 WASH3PC4AMC7 463 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 KDM4BO94953 1096 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ARF3P61204 181 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ARF1P84077 181 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 WASH2PQ6VEQ5 465 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM126BQ8IUX1 230 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 RIT1Q92963 219 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 NXPE2Q96DL1 559 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TRIM64A6NGJ6 449 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 TLX2O43763 284 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 ITGA5P08648 1049 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 EIF2S3P41091 472 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 NR0B1P51843 470 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 SMSP52788 366 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 SEMA3AQ14563 771 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 DECR1Q16698 335 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 MEP1AQ16819 746 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 RABL3Q5HYI8 236 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 EPGNQ6UW88 154 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 SLC9B2Q86UD5 537 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 CMASQ8NFW8 434 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 CEP76Q8TAP6 659 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms