RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SRSF6Q13247 344 aaKnown RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 CMPK2Q5EBM0 449 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 SULT1C3Q6IMI6 304 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 THOC6Q86W42 341 aaKnown RBP16.03■□□□□ 0.16
SDCBP-201ENST00000260130 KIRREL3Q8IZU9 778 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 RHEBL1Q8TAI7 183 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 ENAMQ9NRM1 1142 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 HEY2Q9UBP5 337 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 SLC22A14Q9Y267 594 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 PKD1L2Q7Z442 2459 aa16.03■□□□□ 0.16
SDCBP-201ENST00000260130 LOC105369274A0A096LPK9 316 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 LOC102723532A0A0G2JNH3 316 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 CCDC189A1A4V9 331 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 MEN1O00255 615 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 KERAO60938 352 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 GGT5P36269 586 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 TMPRSS3P57727 454 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 C18orf21Q32NC0 220 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-201ENST00000260130 KLC3Q6P597 504 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 CCDC81Q6ZN84 652 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 OR4N4Q8N0Y3 316 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 PDPRQ8NCN5 879 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 KIAA1143Q96AT1 154 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-201ENST00000260130 NSL1Q96IY1 281 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 GPR78Q96P69 363 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 ATOH8Q96SQ7 321 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 BTBD10Q9BSF8 475 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 AKIRIN1Q9H9L7 192 aaPredicted RBP16.02■□□□□ 0.16
SDCBP-201ENST00000260130 STARD5Q9NSY2 213 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 PCMTD2Q9NV79 361 aa16.02■□□□□ 0.16
SDCBP-201ENST00000260130 TAPBPO15533 448 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 CDH1P12830 882 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 LIFP15018 202 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 RORAP35398 523 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 GDF5P43026 501 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 ETV4P43268 484 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 SLC6A12P48065 614 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 GLRBP48167 497 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 CSNK1G2P78368 415 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 BLMHQ13867 455 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 RHBDD2Q6NTF9 364 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 TIFABQ6ZNK6 161 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 DSELQ8IZU8 1212 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 PLD6Q8N2A8 252 aaKnown RBP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 ABHD11Q8NFV4 315 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 EXT2Q93063 718 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 OR2A5Q96R48 311 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 NDC1Q9BTX1 674 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 IQCGQ9H095 443 aaKnown RBP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 DENND2DQ9H6A0 471 aaPredicted RBP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.15
SDCBP-201ENST00000260130 CPNE5Q9HCH3 593 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 WWOXQ9NZC7 414 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 SRPK3Q9UPE1 567 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 KCNE2Q9Y6J6 123 aa16.02■□□□□ 0.15
SDCBP-201ENST00000260130 PCM1Q15154 2024 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 H0YGG7 62 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 HAT1O14929 419 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 EIF2S1P05198 315 aaKnown RBP16.01■□□□□ 0.15
SDCBP-201ENST00000260130 COL6A2P12110 1019 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 TCN2P20062 427 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 ARF3P61204 181 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-201ENST00000260130 GRM7Q14831 915 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 COL28A1Q2UY09 1125 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 FAM199XQ6PEV8 388 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-201ENST00000260130 ZNF517Q6ZMY9 492 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-201ENST00000260130 PLD3Q8IV08 490 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 TRIM42Q8IWZ5 723 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 KLHDC8AQ8IYD2 350 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 MR1Q95460 341 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 NEIL2Q969S2 332 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 FAM111AQ96PZ2 611 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 EFHD1Q9BUP0 239 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 NUDT4Q9NZJ9 180 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 PTBP2Q9UKA9 531 aaKnown RBP16.01■□□□□ 0.15
SDCBP-201ENST00000260130 CROTQ9UKG9 612 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 DYRK1BQ9Y463 629 aa16.01■□□□□ 0.15
SDCBP-201ENST00000260130 FITM1A5D6W6 292 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 SYCE1LA8MT33 242 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 KLF11O14901 512 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 RFPL1O75677 317 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 IPO13O94829 963 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 WDR47O94967 919 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 CCR8P51685 355 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 ARSFP54793 590 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 KRT72Q14CN4 511 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 TSNAXIP1Q2TAA8 658 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 TTC29Q8NA56 475 aaPredicted RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 OR4K1Q8NGD4 311 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 SLC5A11Q8WWX8 675 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 PTCD3Q96EY7 689 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 TMEM79Q9BSE2 394 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 TMEM120AQ9BXJ8 343 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 C12orf65Q9H3J6 166 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 ZNF358Q9NW07 568 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 DHCR7Q9UBM7 475 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 SUPT3HB4E1H0 165 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms