RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CLDN24A6NM45 220 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 ADAM23O75077 832 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 AOC2O75106 756 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 GCM2O75603 506 aaPredicted RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 NTRK1P04629 796 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 ABCB1P08183 1280 aaPredicted RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 ZNF30P17039 623 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 IDSP22304 550 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 PPIBP23284 216 aaKnown RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 RRM2P31350 389 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 TGFBR2P37173 567 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 FADDQ13158 208 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 HKDC1Q2TB90 917 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 ANXA8L1Q5VT79 327 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 Q6ZVL8 140 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 CAMKMTQ7Z624 323 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 TSEN54Q7Z6J9 526 aaKnown RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 TMC8Q8IU68 726 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 NAGSQ8N159 534 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 CHTF18Q8WVB6 975 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 ATL1Q8WXF7 558 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 FOXJ1Q92949 421 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 DOHHQ9BU89 302 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 SLIRPQ9GZT3 109 aaKnown RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 AP1M2Q9Y6Q5 423 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 PRRC2BQ5JSZ5 2229 aaKnown RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 TPP2P29144 1249 aaPredicted RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 GAB1Q13480 694 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 CCSMST1Q4G0I0 132 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.69□□□□□ -0.06
DDX56-201ENST00000258772 UBE2UQ5VVX9 321 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 GPR153Q6NV75 609 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 DDX53Q86TM3 631 aaKnown RBP14.69□□□□□ -0.06
DDX56-201ENST00000258772 NPAS3Q8IXF0 933 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 COQ8BQ96D53 544 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 TMEM184CQ9NVA4 438 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 RNF6Q9Y252 685 aa14.69□□□□□ -0.06
DDX56-201ENST00000258772 PDE4DIPQ5VU43 2346 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 A0A1W2PRU2 124 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 TTC34A8MYJ7 566 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 PCDH7O60245 1069 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 VIPP01282 170 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 PCGF2P35227 344 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 TGFBR1P36897 503 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 SELENOWP63302 87 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 PCDH1Q08174 1060 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 Q6ZPB1 254 aaPredicted RBP14.68□□□□□ -0.06
DDX56-201ENST00000258772 PAGE2Q7Z2X7 111 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 TMCO2Q7Z6W1 182 aaPredicted RBP14.68□□□□□ -0.06
DDX56-201ENST00000258772 P3H2Q8IVL5 708 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 MINDY2Q8NBR6 621 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 C11orf65Q8NCR3 313 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 OR7G3Q8NG95 312 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 KCNC2Q96PR1 638 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 SLC46A2Q9BY10 475 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 EPS8L2Q9H6S3 715 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 SH3BP4Q9P0V3 963 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 OSGIN1Q9UJX0 560 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 MAFFQ9ULX9 164 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 MAPRE3Q9UPY8 281 aa14.68□□□□□ -0.06
DDX56-201ENST00000258772 MGAT4DA6NG13 374 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TTC36A6NLP5 189 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 EFCAB9A8MZ26 197 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 CYP2A6P11509 494 aaPredicted RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 TGM1P22735 817 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 VIPR1P32241 457 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ETV3P41162 512 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 BRAT1Q6PJG6 821 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TMEM25Q86YD3 366 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 OR2A12Q8NGT7 310 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 HUS1BQ8NHY5 278 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 SLC38A4Q969I6 547 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TMEM159Q96B96 161 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ITPKCQ96DU7 683 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ZHX1-C8orf76Q96EF9 292 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 HHIPL1Q96JK4 782 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 FEVQ99581 238 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 COPS4Q9BT78 406 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ITPAQ9BY32 194 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ATAD3AQ9NVI7 634 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 GIN1Q9NXP7 522 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 SPG21Q9NZD8 308 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ZNF282Q9UDV7 671 aaPredicted RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 PNMA8BQ9ULN7 279 aaPredicted RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 PAIP2BQ9ULR5 123 aaKnown RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 LYVE1Q9Y5Y7 322 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 FADS2P1A8MWK0 482 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TSPAN6O43657 245 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 SLC16A8O95907 504 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 C21orf33P30042 268 aaPredicted RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 PREPP48147 710 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 RXRGP48443 463 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 DCDC1P59894 354 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TEAD4Q15561 434 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 SYT16Q17RD7 645 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 PLD3Q8IV08 490 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 RAVER1Q8IY67 606 aaKnown RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 LILRA3Q8N6C8 439 aaPredicted RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 GPR156Q8NFN8 814 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms