RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 THUMPD1Q9NXG2 353 aaKnown RBP20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 GIN1Q9NXP7 522 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 AASSQ9UDR5 926 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 TBX21Q9UL17 535 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 MRPS14O60783 128 aaKnown RBP20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 LEFTY1O75610 366 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 TIMP2P16035 220 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 EFNA1P20827 205 aaPredicted RBP20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 FSHRP23945 695 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 CTSCP53634 463 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 EGFLAMQ63HQ2 1017 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 CHTF18Q8WVB6 975 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 YIPF6Q96EC8 236 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF347Q96SE7 839 aa20.87■□□□□ 0.93
SH2D3A-201ENST00000245908 SLC5A10A0PJK1 596 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 FKTNO75072 461 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 CNOT3O75175 753 aaKnown RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 C9P02748 559 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ABCB1P08183 1280 aaPredicted RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ANXA4P09525 319 aaPredicted RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 IMPA1P29218 277 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 MAP2K4P45985 399 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 BDKRB1P46663 353 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 PREPP48147 710 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 EIF2B2P49770 351 aaKnown RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 CRYBA2P53672 197 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 SYT6Q5T7P8 510 aaPredicted RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ANXA8L1Q5VT79 327 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 NPAS3Q8IXF0 933 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF557Q8N988 423 aaPredicted RBP20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 RASGEF1AQ8N9B8 481 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ATG16L2Q8NAA4 619 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 KREMEN2Q8NCW0 462 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 VPS37AQ8NEZ2 397 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 ZFP90Q8TF47 636 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 MYLIPQ8WY64 445 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 FOXJ1Q92949 421 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 IRF7Q92985 503 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 COQ8BQ96D53 544 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 VPS35Q96QK1 796 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 EPYCQ99645 322 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 CCNB1IP1Q9NPC3 277 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 SIRT5Q9NXA8 310 aa20.86■□□□□ 0.93
SH2D3A-201ENST00000245908 NPC1O15118 1278 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 SLC22A1O15245 554 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ATG13O75143 517 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 NUDT7P0C024 238 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 TYRP14679 529 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 IDSP22304 550 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 HPCAL1P37235 193 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 OPRL1P41146 370 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 MASP1P48740 699 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 PRLHRP49683 370 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 KCNJ10P78508 379 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 E2F2Q14209 437 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 SPIN4Q56A73 249 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 TMEM215Q68D42 235 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ADNP2Q6IQ32 1131 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 IGFN1Q86VF2 1251 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 OR7G3Q8NG95 312 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF296Q8WUU4 475 aaPredicted RBP20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 SH3YL1Q96HL8 342 aaPredicted RBP20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 PKP4Q99569 1192 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 MYOCQ99972 504 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 NECTIN3Q9NQS3 549 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ATAD3AQ9NVI7 634 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 CCL16O15467 120 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 MAN1A2O60476 641 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 FGF18O76093 207 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 MT-ND2P03891 347 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 EPHA2P29317 976 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 PCGF2P35227 344 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 GAB1Q13480 694 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 RGNQ15493 299 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 HKDC1Q2TB90 917 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF284Q2VY69 593 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ARSIQ5FYB1 569 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF362Q5T0B9 420 aaPredicted RBP20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 LINC00299Q6ZSB3 139 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 TECPR1Q7Z6L1 1165 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 SVOPQ8N4V2 548 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 LILRA3Q8N6C8 439 aaPredicted RBP20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 TPD52L3Q96J77 140 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 CCM2Q9BSQ5 444 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 HCFC1R1Q9NWW0 138 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 DOCK6Q96HP0 2047 aa20.85■□□□□ 0.93
SH2D3A-201ENST00000245908 SLC16A8O95907 504 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 MAPK9P45984 424 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 MVKQ03426 396 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 OCA2Q04671 838 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 DPPA4Q7L190 304 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 CCDC71Q8IV32 467 aaPredicted RBP20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF540Q8NDQ6 660 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 HUS1BQ8NHY5 278 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 GLYATL1Q969I3 302 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 SPHK2Q9NRA0 654 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 ADPRHL2Q9NX46 363 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 SUV39H1O43463 412 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 RGS10O43665 173 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 FAM20BO75063 409 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms