RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PLAGL1Q9UM63 463 aa16.34■□□□□ 0.21
CDKN1A-201ENST00000244741 ASF1AQ9Y294 204 aa16.34■□□□□ 0.21
CDKN1A-201ENST00000244741 POLR3HQ9Y535 204 aaPredicted RBP16.34■□□□□ 0.21
CDKN1A-201ENST00000244741 GOLGA4Q13439 2230 aaKnown RBP16.34■□□□□ 0.21
CDKN1A-201ENST00000244741 TMEM131Q92545 1883 aa16.34■□□□□ 0.21
CDKN1A-201ENST00000244741 NPPAP01160 153 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 NME1P15531 152 aaKnown RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 HTR1EP28566 365 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 HMOX2P30519 316 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PIK3CGP48736 1102 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 SELPLGQ14242 412 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 SPRED1Q7Z699 444 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PAPD5Q8NDF8 572 aaKnown RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TFGQ92734 400 aaPredicted RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PPM1MQ96MI6 270 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 EGFL8Q99944 293 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 ARRDC1-AS1Q9H2J1 176 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 ANAPC2Q9UJX6 822 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PDE10AQ9Y233 779 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TP53BP1Q12888 1972 aaPredicted RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 MUC6Q6W4X9 2439 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 RNF103-CHMP3A0A140T963 221 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 ARHGEF33A8MVX0 844 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 H3BSA7 217 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 SLC2A4P14672 509 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 ACADLP28330 430 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 DMPKQ09013 629 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 BNIP3Q12983 259 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 ADRM1Q16186 407 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 FXNQ16595 210 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TCEAL6Q6IPX3 200 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PDZD3Q86UT5 571 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TCEAL3Q969E4 200 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 RMND5BQ96G75 393 aaPredicted RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 CD244Q9BZW8 370 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 DPEP2Q9H4A9 486 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 IL21RQ9HBE5 538 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TAAR2Q9P1P5 351 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 TDRKHQ9Y2W6 561 aaKnown RBP16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 V9GYQ6 96 aa16.33■□□□□ 0.2
CDKN1A-201ENST00000244741 PRR19A6NJB7 356 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 IFRD1O00458 451 aaPredicted RBP16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 FFAR3O14843 346 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 GPR42O15529 346 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 MT-ND1P03886 318 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 MPC1LP0DKB6 136 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 RPIAP49247 311 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 BLKP51451 505 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 PLIN5Q00G26 463 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 AASDHQ4L235 1098 aaPredicted RBP16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 TRIM61Q5EBN2 209 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 FAM46DQ8NEK8 389 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 GPBAR1Q8TDU6 330 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 JPH3Q8WXH2 748 aaPredicted RBP16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 RHBDF1Q96CC6 855 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 MPP4Q96JB8 637 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 HAUS8Q9BT25 410 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 FARSBQ9NSD9 589 aaKnown RBP16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 PTTG2Q9NZH5 202 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 ACSL5Q9ULC5 683 aa16.32■□□□□ 0.2
CDKN1A-201ENST00000244741 DYTNA2CJ06 578 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 GFYI3L273 518 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 RASAL1O95294 804 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 GSTM1P09488 218 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 UMPSP11172 480 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 FCGR1AP12314 374 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF23P17027 643 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 CTSKP43235 329 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 MTPNP58546 118 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 GSTM4Q03013 218 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 MERTKQ12866 999 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 DYNC1I2Q13409 638 aaKnown RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 KIAA0040Q15053 153 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 DEFB133Q30KQ1 61 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 B3GNT6Q6ZMB0 384 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 PROSER1Q86XN7 944 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 TBC1D21Q8IYX1 336 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 C2orf73Q8N5S3 287 aaPredicted RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 TRIML2Q8N7C3 387 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 FOPNLQ96NB1 174 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 SEPHS2Q99611 448 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 ARL15Q9NXU5 204 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 WWOXQ9NZC7 414 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 SUSD2Q9UGT4 822 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 ANGPTL3Q9Y5C1 460 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 CEPT1Q9Y6K0 416 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 B4DGG1 531 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 C1orf105O95561 183 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 JAK1P23458 1154 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 VARSP26640 1264 aaKnown RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 CDH15P55291 814 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 RPL38P63173 70 aaKnown RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 TCF15Q12870 199 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 RPA4Q13156 261 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 UAP1L1Q3KQV9 507 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms