RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CPXM2Q8N436 756 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 MUL1Q969V5 352 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 LRRC3BQ96PB8 259 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 TCF25Q9BQ70 676 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 MIR1-1HGQ9H1L0 117 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 REEP1Q9H902 201 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 TDP1Q9NUW8 608 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 GPATCH2Q9NW75 528 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 TMEM45AQ9NWC5 275 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 BLOC1S6Q9UL45 172 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 EXO1Q9UQ84 846 aaKnown RBP8.81□□□□□ -1
SYDE2-201ENST00000234668 ERVW-1Q9UQF0 538 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 PCYT1BQ9Y5K3 369 aaPredicted RBP8.81□□□□□ -1
SYDE2-201ENST00000234668 SCN8AQ9UQD0 1980 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 FAM227AF5H4B4 570 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 M0R3G1 203 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 SCAMP1O15126 338 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 LILRB3O75022 631 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 ELFN1P0C7U0 828 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 SYN1P17600 705 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 MAPK1P28482 360 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 KRT20P35900 424 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 HNF4AP41235 474 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 CRISP3P54108 245 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 POLR2LP62875 67 aaKnown RBP8.81□□□□□ -1
SYDE2-201ENST00000234668 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 UTP15Q8TED0 518 aaKnown RBP8.81□□□□□ -1
SYDE2-201ENST00000234668 ZNF480Q8WV37 535 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 DNASE1L2Q92874 299 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
SYDE2-201ENST00000234668 FEVQ99581 238 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 TUBA1CQ9BQE3 449 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 ROGDIQ9GZN7 287 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 SPHK2Q9NRA0 654 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 ASIC5Q9NY37 505 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 TMEM98Q9Y2Y6 226 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 SNX8Q9Y5X2 465 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 NOTCH4Q99466 2003 aa8.81□□□□□ -1
SYDE2-201ENST00000234668 A0A0G2JN53 185 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 TMEM247A6NEH6 219 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 WASHC1A8K0Z3 465 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 M0QX08 132 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 KLK1P06870 262 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 IDSP22304 550 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 DNAJA1P31689 397 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 CDH12P55289 794 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 DNASE1L3Q13609 305 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 ZNF284Q2VY69 593 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 PLEKHS1Q5SXH7 462 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 MPP7Q5T2T1 576 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 KDM4DQ6B0I6 523 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 WASH2PQ6VEQ5 465 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 UTS2BQ765I0 119 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 ARMCX6Q7L4S7 300 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 OLIG3Q7RTU3 272 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 GRASPQ7Z6J2 395 aaPredicted RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 TSEN54Q7Z6J9 526 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 C12orf40Q86WS4 652 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 EGFL6Q8IUX8 553 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 ELMOD1Q8N336 334 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 OR9Q2Q8NGE9 314 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 CSGALNACT1Q8TDX6 532 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 BTN2A2Q8WVV5 523 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 GTPBP3Q969Y2 492 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 ASPSCR1Q9BZE9 553 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 FAIMQ9NVQ4 179 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 TAS2R16Q9NYV7 291 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 PCDHB11Q9Y5F2 797 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SLC16A6O15403 523 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SUV39H1O43463 412 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 MMP20O60882 483 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 MOSPD3O75425 235 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 MYO1DO94832 1006 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 GPX2P18283 190 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 LAG3P18627 525 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 VIPR1P32241 457 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SOAT1P35610 550 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 VEGFBP49765 207 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 IFITM3Q01628 133 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 C2orf80Q0P641 193 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SLBPQ14493 270 aaKnown RBP eCLIP8.8□□□□□ -1
SYDE2-201ENST00000234668 CLCA4Q14CN2 919 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 RGNQ15493 299 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SERPINA11Q86U17 422 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 CROCCP3Q8IVE0 287 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 SLC5A8Q8N695 610 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 VN1R2Q8NFZ6 395 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 NFKBIDQ8NI38 313 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 GLYATL1Q969I3 302 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 OTUB1Q96FW1 271 aaPredicted RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 SH3YL1Q96HL8 342 aaPredicted RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 CPEB1Q9BZB8 566 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 ABCG4Q9H172 646 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 TM9SF3Q9HD45 589 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 TRNAU1APQ9NX07 287 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 ENPP5Q9UJA9 477 aa8.8□□□□□ -1
SYDE2-201ENST00000234668 RUVBL1Q9Y265 456 aaKnown RBP8.8□□□□□ -1
SYDE2-201ENST00000234668 PPIL1Q9Y3C6 166 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms