RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 CD244Q9BZW8 370 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 PELI2Q9HAT8 420 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 NMRAL1Q9HBL8 299 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■■□ 21.5
VEGFA-201ENST00000230480 BAHCC1Q9P281 2608 aa13.04□□□□□ -0.32
VEGFA-201ENST00000230480 A0A087X1B8 175 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 OR2W5A6NFC9 320 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SOCS6O14544 535 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 JRKO75564 520 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 STK16O75716 305 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 WDR47O94967 919 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 ALBP02768 609 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 C1GALT1C1LP0DN25 315 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 AGXTP21549 392 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SERPINB8P50452 374 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SERPINB9P50453 376 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 RPS15P62841 145 aaKnown RBP13.03□□□□□ -0.32
VEGFA-201ENST00000230480 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 FAM53BQ14153 422 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 ACAP2Q15057 778 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SHISA6Q6ZSJ9 500 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 RAPH1Q70E73 1250 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 APLFQ8IW19 511 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-201ENST00000230480 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 OR9A4Q8NGU2 314 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 NT5CQ8TCD5 201 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
VEGFA-201ENST00000230480 FKBP10Q96AY3 582 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 EGFL8Q99944 293 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 VPS11Q9H270 941 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 MLXIPLQ9NP71 852 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 TXLNGQ9NUQ3 528 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 IFT80Q9P2H3 777 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-201ENST00000230480 FETUBQ9UGM5 382 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 NDOR1Q9UHB4 597 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
VEGFA-201ENST00000230480 PTRH2Q9Y3E5 179 aaKnown RBP13.03□□□□□ -0.32
VEGFA-201ENST00000230480 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 OR1F1O43749 312 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 SIX3O95343 332 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 INHBAP08476 426 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 SNRPAP09012 282 aaKnown RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 CASP2P42575 452 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 POLE2P56282 527 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 CDC16Q13042 620 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 DOC2AQ14183 400 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 SETDB1Q15047 1291 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 MUM1Q2TAK8 710 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ATG9BQ674R7 924 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 BORAQ6PGQ7 559 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 TMPRSS11BQ86T26 416 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 TBC1D1Q86TI0 1168 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ASPGQ86U10 573 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ZC3H7AQ8IWR0 971 aaKnown RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF843Q8N446 348 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-201ENST00000230480 STT3BQ8TCJ2 826 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 EXT2Q93063 718 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 CABS1Q96KC9 395 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 WDR54Q9H977 334 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF304Q9HCX3 659 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 DNAJC11Q9NVH1 559 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 IRAK4Q9NWZ3 460 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 NUDT4Q9NZJ9 180 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 CD274Q9NZQ7 290 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 ZFP69BQ9UJL9 534 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 KCNE2Q9Y6J6 123 aa13.02□□□□□ -0.33
VEGFA-201ENST00000230480 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SGK494L7N484 410 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 PPP6CO00743 305 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 CEACAM4O75871 244 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 ZGLP1P0C6A0 271 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 IL1RNP18510 177 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 NR1D1P20393 614 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 AHRP35869 848 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 HSD17B3P37058 310 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 MC1RQ01726 317 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 KLC1Q07866 573 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 Q0VFX4 171 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 DSG2Q14126 1118 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SLBPQ14493 270 aaKnown RBP eCLIP13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SSPNQ14714 243 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 PCBP2Q15366 365 aaKnown RBP eCLIP13.01□□□□□ -0.331e-10■■□□□ 11.4
VEGFA-201ENST00000230480 PRMT9Q6P2P2 845 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms